Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PTCH1Q13635 SNORA40.6-201ENST00000391153 128 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 MTCO3P40-201ENST00000392516 676 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU2-23P-201ENST00000410545 195 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 EIF1P1-201ENST00000421436 341 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC011352.1-201ENST00000512300 793 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AL117351.2-201ENST00000513571 157 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.91□□□□□ -2.1
PTCH1Q13635 Y_RNA.687-201ENST00000516558 91 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-314P-201ENST00000516574 104 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 SNORA31.23-201ENST00000517219 133 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 MTND4LP26-201ENST00000518144 282 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC017083.3-201ENST00000609955 700 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PTCH1Q13635 Y_RNA.1-201ENST00000352915 104 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-212P-201ENST00000362642 104 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-1097P-201ENST00000363586 107 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 Y_RNA.159-201ENST00000363674 87 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-1210P-201ENST00000363775 107 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-108P-201ENST00000365558 107 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 Y_RNA.554-201ENST00000384672 102 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 CALM2P3-201ENST00000400429 449 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RAP1BP3-201ENST00000407180 549 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 PGBD4P6-201ENST00000421501 610 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 MTCO2P19-201ENST00000427513 598 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC002486.1-201ENST00000435098 391 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AC009646.1-201ENST00000510455 318 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 Y_RNA.675-201ENST00000516389 149 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 SNORA43.2-201ENST00000516652 128 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-1220P-201ENST00000517126 108 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCH1Q13635 AP001094.1-201ENST00000579805 193 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC011712.1-201ENST00000588959 234 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AL391646.1-201ENST00000603860 190 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC092954.2-201ENST00000609103 430 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AL359880.1-201ENST00000621879 266 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC093648.1-201ENST00000623546 606 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC009161.2-201ENST00000624626 138 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AL157786.1-207ENST00000627771 695 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.9□□□□□ -2.1
PTCH1Q13635 SNORD115-3-201ENST00000363100 82 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 RNU6-234P-201ENST00000365229 104 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 RNU6-1080P-201ENST00000383982 107 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 MIR578-201ENST00000384828 96 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 MIR29C-201ENST00000385231 88 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 CBX3P9-201ENST00000402326 552 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 MIR548F1-201ENST00000408667 84 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 RNU4-55P-201ENST00000410731 137 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.9□□□□□ -2.11
PTCH1Q13635 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.9□□□□□ -2.11
PTCH1Q13635 USP9YP18-201ENST00000425912 695 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AC073464.1-201ENST00000429823 534 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.9□□□□□ -2.11
PTCH1Q13635 AP001025.1-201ENST00000486139 332 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AC019235.1-201ENST00000503847 207 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.9□□□□□ -2.11
PTCH1Q13635 RN7SKP49-201ENST00000516675 260 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.9□□□□□ -2.11
PTCH1Q13635 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.9□□□□□ -2.11
PTCH1Q13635 AP001893.2-201ENST00000526949 202 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.9□□□□□ -2.11
PTCH1Q13635 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.9□□□□□ -2.11
PTCH1Q13635 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AC090897.2-201ENST00000581715 130 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 U6atac.1-201ENST00000616025 117 ntBASIC1.9□□□□□ -2.11
PTCH1Q13635 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.9□□□□□ -2.11
PTCH1Q13635 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PTCH1Q13635 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
PTCH1Q13635 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.89□□□□□ -2.11
PTCH1Q13635 RNU6-74P-201ENST00000384235 107 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 RNU6-456P-201ENST00000384493 107 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 MIR548J-201ENST00000408833 112 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 RNU6-387P-201ENST00000411331 105 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 RPL21P90-201ENST00000415692 466 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTCH1Q13635 GPR143P-201ENST00000434155 205 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 UBE2V1P8-201ENST00000437166 265 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.89□□□□□ -2.11
PTCH1Q13635 COX6CP14-201ENST00000469580 174 ntBASIC1.89□□□□□ -2.11
PTCH1Q13635 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms