Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.63□□□□□ -2.15
RAB40BQ12829 RPS29P21-201ENST00000496272 170 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC091885.1-201ENST00000506658 268 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC005741.1-201ENST00000511094 432 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 SNORA19.2-201ENST00000516013 114 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 RNU6-1069P-201ENST00000516612 133 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 RNU6-612P-201ENST00000516909 102 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 RNU6-835P-201ENST00000516974 104 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC104576.1-201ENST00000524225 88 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 CYP4A27P-201ENST00000567218 190 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 AC092807.2-201ENST00000609367 243 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC087241.4-201ENST00000612441 480 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 PCGEM1.1-201ENST00000613431 131 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 U1.36-201ENST00000620684 176 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AL359880.1-201ENST00000621879 266 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.63□□□□□ -2.15
RAB40BQ12829 SNORA43.4-201ENST00000629559 138 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC009541.1-201ENST00000438279 2662 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 MTND4P23-201ENST00000447723 1363 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RAB40BQ12829 SNORA67.3-201ENST00000384366 140 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 Y_RNA.559-201ENST00000384686 107 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 TIMM9P3-201ENST00000428659 274 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 FTH1P25-201ENST00000447665 469 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 AL513124.1-201ENST00000450410 614 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 MTND3P16-201ENST00000452205 344 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 RNA5SP57-201ENST00000459463 123 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 AC104564.1-201ENST00000493028 407 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 AL512360.1-201ENST00000555346 234 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.62□□□□□ -2.15
RAB40BQ12829 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.62□□□□□ -2.15
RAB40BQ12829 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.62□□□□□ -2.15
RAB40BQ12829 MIR5692C1-201ENST00000585309 91 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 AC064836.2-201ENST00000609491 462 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 AC048344.4-201ENST00000619744 527 ntBASIC1.62□□□□□ -2.15
RAB40BQ12829 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAB40BQ12829 RNU6-378P-201ENST00000384324 107 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RAB40BQ12829 MIR208B-201ENST00000401172 77 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AL356432.1-201ENST00000405809 419 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 RNU6-648P-201ENST00000410190 107 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 RNA5SP501-201ENST00000410990 112 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 MTCO3P41-201ENST00000414801 328 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 ARL5AP1-201ENST00000418991 388 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 UBE2V1P4-201ENST00000425374 344 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.61□□□□□ -2.15
RAB40BQ12829 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.61□□□□□ -2.15
RAB40BQ12829 RNU6-1208P-201ENST00000459588 107 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AC021146.2-201ENST00000504736 556 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 Y_RNA.693-201ENST00000516641 110 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.61□□□□□ -2.15
RAB40BQ12829 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.61□□□□□ -2.15
RAB40BQ12829 EIF4A1P12-201ENST00000551910 141 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AC024909.2-201ENST00000553035 286 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 BNIP3P25-201ENST00000596023 559 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.61□□□□□ -2.15
RAB40BQ12829 AC005296.1-201ENST00000616145 209 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 AL590240.4-201ENST00000616908 390 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.61□□□□□ -2.15
RAB40BQ12829 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RAB40BQ12829 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RAB40BQ12829 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RAB40BQ12829 AC233981.2-201ENST00000611524 1614 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 RNU6-227P-201ENST00000362865 103 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 RNA5SP493-201ENST00000364115 91 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 Y_RNA.332-201ENST00000365271 113 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 RNU6-1329P-201ENST00000365664 107 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 RNA5SP212-201ENST00000391223 107 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 RNU2-41P-201ENST00000410991 178 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 MTND3P9-201ENST00000429526 346 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RAB40BQ12829 AL035666.1-201ENST00000446195 348 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.6□□□□□ -2.15
RAB40BQ12829 U8.21-201ENST00000459536 136 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 AC093534.1-201ENST00000504977 132 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB40BQ12829 AC025465.4-201ENST00000513422 638 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 AP005639.2-201ENST00000527592 928 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB40BQ12829 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB40BQ12829 AC103591.3-201ENST00000608684 209 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 AL136221.1-201ENST00000621449 509 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB40BQ12829 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.6□□□□□ -2.15
RAB40BQ12829 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.6□□□□□ -2.15
RAB40BQ12829 LINC02555-201ENST00000563933 1951 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.59□□□□□ -2.15
RAB40BQ12829 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RAB40BQ12829 RNU6-438P-201ENST00000365561 103 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 MIR514A2-201ENST00000385131 88 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 MIR514A3-201ENST00000385132 88 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms