Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.82□□□□□ -2.12
CKAP4Q07065 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.81□□□□□ -2.12
CKAP4Q07065 RNU6-95P-201ENST00000384697 107 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 MIR483-201ENST00000385070 76 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 RN7SKP158-201ENST00000410453 326 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.81□□□□□ -2.12
CKAP4Q07065 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.81□□□□□ -2.12
CKAP4Q07065 AL590632.1-201ENST00000424289 371 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.81□□□□□ -2.12
CKAP4Q07065 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.81□□□□□ -2.12
CKAP4Q07065 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.81□□□□□ -2.12
CKAP4Q07065 RNU6-277P-201ENST00000516272 106 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 Y_RNA.682-201ENST00000516457 100 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 ACA59.2-201ENST00000517061 156 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 RAB11AP2-201ENST00000545905 639 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.81□□□□□ -2.12
CKAP4Q07065 AC078899.2-201ENST00000595282 212 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AL109918.3-201ENST00000603072 338 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AL132765.2-201ENST00000610812 351 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 Y_RNA.804-201ENST00000615262 101 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AC063943.3-201ENST00000615562 356 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AC104985.2-201ENST00000620598 500 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AC091932.3-201ENST00000624223 323 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 AC099654.5-201ENST00000636479 350 ntBASIC1.81□□□□□ -2.12
CKAP4Q07065 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CKAP4Q07065 HAUS6P2-201ENST00000433254 2404 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CKAP4Q07065 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CKAP4Q07065 RNU6-428P-201ENST00000362942 107 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 RNU6-105P-201ENST00000363909 104 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 RNU6-336P-201ENST00000364891 107 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 RNU6-487P-201ENST00000365430 104 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 RNU6-827P-201ENST00000365553 106 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 PTGES3P4-201ENST00000426243 356 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 RPL30P4-201ENST00000429309 333 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 AC093019.1-201ENST00000443135 252 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.8□□□□□ -2.12
CKAP4Q07065 AC130509.1-201ENST00000464158 433 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 AC096745.1-201ENST00000509945 370 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.8□□□□□ -2.12
CKAP4Q07065 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
CKAP4Q07065 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.8□□□□□ -2.12
CKAP4Q07065 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.8□□□□□ -2.12
CKAP4Q07065 AC005668.1-201ENST00000571142 476 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 MIR4287-201ENST00000579398 78 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 CPDP1-201ENST00000579660 283 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 POLR3GP2-201ENST00000588366 668 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.8□□□□□ -2.12
CKAP4Q07065 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.8□□□□□ -2.12
CKAP4Q07065 C8orf59P2-201ENST00000603441 271 ntBASIC1.8□□□□□ -2.12
CKAP4Q07065 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.8□□□□□ -2.12
CKAP4Q07065 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.8□□□□□ -2.12
CKAP4Q07065 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CKAP4Q07065 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CKAP4Q07065 RNU6-843P-201ENST00000384454 104 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 Y_RNA.529-201ENST00000384586 119 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 RNU6-748P-201ENST00000384648 107 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 MT-TD-201ENST00000387419 68 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AL079342.1-201ENST00000401460 267 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 Z92545.1-201ENST00000411782 234 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AC074117.2-201ENST00000417130 397 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AL139396.1-201ENST00000421137 167 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 RPS3AP52-201ENST00000435639 297 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 FABP5P14-201ENST00000437273 393 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKAP4Q07065 AC007969.2-201ENST00000441891 191 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AL031274.1-201ENST00000450334 232 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 RNU6-1037P-201ENST00000459571 107 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 MED28P2-201ENST00000475771 317 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AP001025.1-201ENST00000486139 332 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 MTND3P22-201ENST00000510932 243 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 RNU6-377P-201ENST00000515965 102 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 RNU5B-3P-201ENST00000516601 115 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 RNU6-273P-201ENST00000516937 96 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AC104576.1-201ENST00000524225 88 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.79□□□□□ -2.12
CKAP4Q07065 CBX3P7-201ENST00000532876 502 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 TRAV32-201ENST00000553993 340 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 MIR4790-201ENST00000577799 79 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 MIR4529-201ENST00000578110 78 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AC105245.1-201ENST00000581934 244 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AL160281.1-201ENST00000605307 311 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 U4atac.1-201ENST00000618345 95 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AL359697.1-201ENST00000624879 587 ntBASIC1.79□□□□□ -2.12
CKAP4Q07065 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.78□□□□□ -2.12
CKAP4Q07065 MTND4P23-201ENST00000447723 1363 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CKAP4Q07065 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CKAP4Q07065 RNU6-622P-201ENST00000384272 103 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 SNORD116-20-201ENST00000384529 92 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 RNU6-19P-201ENST00000384718 107 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CKAP4Q07065 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 MIR548F5-201ENST00000408421 86 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 MIR1294-201ENST00000408503 142 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms