Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.64□□□□□ -1.99
LTBQ06643 snoU13.26-201ENST00000459452 105 ntBASIC2.64□□□□□ -1.99
LTBQ06643 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.64□□□□□ -1.99
LTBQ06643 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBQ06643 RNU6-397P-201ENST00000516226 104 ntBASIC2.64□□□□□ -1.99
LTBQ06643 Y_RNA.673-201ENST00000516306 88 ntBASIC2.64□□□□□ -1.99
LTBQ06643 RNU6-794P-201ENST00000517261 64 ntBASIC2.64□□□□□ -1.99
LTBQ06643 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBQ06643 AP004607.1-201ENST00000524456 203 ntBASIC2.64□□□□□ -1.99
LTBQ06643 MRPS36P4-201ENST00000534436 298 ntBASIC2.64□□□□□ -1.99
LTBQ06643 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.64□□□□□ -1.99
LTBQ06643 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.64□□□□□ -1.99
LTBQ06643 MIR3668-201ENST00000582138 75 ntBASIC2.64□□□□□ -1.99
LTBQ06643 AC125232.2-201ENST00000592457 143 ntBASIC2.64□□□□□ -1.99
LTBQ06643 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBQ06643 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.64□□□□□ -1.99
LTBQ06643 AL159153.1-201ENST00000619688 317 ntBASIC2.64□□□□□ -1.99
LTBQ06643 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBQ06643 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LTBQ06643 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LTBQ06643 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
LTBQ06643 AP003122.5-201ENST00000527668 3766 ntBASIC2.64□□□□□ -1.99
LTBQ06643 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LTBQ06643 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.63□□□□□ -1.99
LTBQ06643 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
LTBQ06643 Y_RNA.307-201ENST00000365022 117 ntBASIC2.63□□□□□ -1.99
LTBQ06643 MT-TW-201ENST00000387382 68 ntBASIC2.63□□□□□ -1.99
LTBQ06643 RNU6-130P-201ENST00000411112 103 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AP000275.1-201ENST00000411943 390 ntBASIC2.63□□□□□ -1.99
LTBQ06643 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.63□□□□□ -1.99
LTBQ06643 RPL26P27-201ENST00000414397 437 ntBASIC2.63□□□□□ -1.99
LTBQ06643 Z82188.1-201ENST00000436709 154 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC105272.1-201ENST00000438604 198 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC243964.1-201ENST00000441814 261 ntBASIC2.63□□□□□ -1.99
LTBQ06643 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.63□□□□□ -1.99
LTBQ06643 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LTBQ06643 U8.22-201ENST00000459141 133 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC006483.1-201ENST00000487308 313 ntBASIC2.63□□□□□ -1.99
LTBQ06643 RPS27AP10-201ENST00000496103 208 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.63□□□□□ -1.99
LTBQ06643 AC091874.1-201ENST00000511402 339 ntBASIC2.63□□□□□ -1.99
LTBQ06643 SNORA25.11-201ENST00000515935 105 ntBASIC2.63□□□□□ -1.99
LTBQ06643 RN7SKP272-201ENST00000516988 232 ntBASIC2.63□□□□□ -1.99
LTBQ06643 RNU6-897P-201ENST00000517135 105 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC010186.2-204ENST00000537668 439 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.63□□□□□ -1.99
LTBQ06643 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.63□□□□□ -1.99
LTBQ06643 AC078899.3-201ENST00000599065 212 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC062037.2-201ENST00000610137 73 ntBASIC2.63□□□□□ -1.99
LTBQ06643 MIR6134-201ENST00000617606 109 ntBASIC2.63□□□□□ -1.99
LTBQ06643 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.63□□□□□ -1.99
LTBQ06643 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LTBQ06643 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LTBQ06643 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LTBQ06643 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LTBQ06643 AC091564.4-201ENST00000533934 2194 ntBASIC2.62□□□□□ -1.99
LTBQ06643 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LTBQ06643 AC062016.1-201ENST00000355719 319 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU6-379P-201ENST00000363813 104 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU6-770P-201ENST00000363929 105 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU4-50P-201ENST00000364361 141 ntBASIC2.62□□□□□ -1.99
LTBQ06643 Y_RNA.276-201ENST00000364732 109 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU1-100P-201ENST00000365255 165 ntBASIC2.62□□□□□ -1.99
LTBQ06643 Y_RNA.358-201ENST00000365491 99 ntBASIC2.62□□□□□ -1.99
LTBQ06643 Y_RNA.476-201ENST00000384347 108 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU6-1035P-201ENST00000384477 107 ntBASIC2.62□□□□□ -1.99
LTBQ06643 MIR181B1-201ENST00000385240 110 ntBASIC2.62□□□□□ -1.99
LTBQ06643 MIR888-201ENST00000401186 77 ntBASIC2.62□□□□□ -1.99
LTBQ06643 SNORD88.1-201ENST00000408684 91 ntBASIC2.62□□□□□ -1.99
LTBQ06643 MTCO3P19-201ENST00000415864 321 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AL451074.5-201ENST00000415894 435 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AC099548.1-201ENST00000421443 426 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.62□□□□□ -1.99
LTBQ06643 USP9YP16-201ENST00000430287 407 ntBASIC2.62□□□□□ -1.99
LTBQ06643 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.62□□□□□ -1.99
LTBQ06643 FCF1P4-201ENST00000448326 183 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AL109933.2-201ENST00000452651 260 ntBASIC2.62□□□□□ -1.99
LTBQ06643 USP9YP23-201ENST00000455085 407 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RN7SKP210-201ENST00000459176 261 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RPL23AP49-201ENST00000492925 468 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AC006445.2-201ENST00000510061 472 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU6-408P-201ENST00000515910 100 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNY3P15-201ENST00000516297 97 ntBASIC2.62□□□□□ -1.99
LTBQ06643 RNU6-911P-201ENST00000516523 104 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.62□□□□□ -1.99
LTBQ06643 AC104581.2-201ENST00000572227 430 ntBASIC2.62□□□□□ -1.99
LTBQ06643 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.62□□□□□ -1.99
LTBQ06643 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
LTBQ06643 AC010928.2-201ENST00000588017 287 ntBASIC2.62□□□□□ -1.99
LTBQ06643 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.62□□□□□ -1.99
LTBQ06643 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LTBQ06643 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LTBQ06643 AC092435.3-201ENST00000565538 3654 ntBASIC2.62□□□□□ -1.99
LTBQ06643 FAM35BP-202ENST00000497389 3337 ntBASIC2.62□□□□□ -1.99
LTBQ06643 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
LTBQ06643 Y_RNA.19-201ENST00000362462 99 ntBASIC2.61□□□□□ -1.99
LTBQ06643 Y_RNA.105-201ENST00000363182 111 ntBASIC2.61□□□□□ -1.99
LTBQ06643 Y_RNA.376-201ENST00000365638 108 ntBASIC2.61□□□□□ -1.99
LTBQ06643 Y_RNA.471-201ENST00000384312 102 ntBASIC2.61□□□□□ -1.99
LTBQ06643 Y_RNA.483-201ENST00000384380 101 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms