Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.38□□□□□ -1.87
ATXN1P54253 SNORA31.19-201ENST00000517079 126 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATXN1P54253 AC093023.1-201ENST00000547375 507 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.38□□□□□ -1.87
ATXN1P54253 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 AC099506.2-201ENST00000623074 221 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 AC110079.1-202ENST00000635213 138 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 U6.104-201ENST00000637979 90 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.38□□□□□ -1.87
ATXN1P54253 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATXN1P54253 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATXN1P54253 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
ATXN1P54253 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.38□□□□□ -1.87
ATXN1P54253 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
ATXN1P54253 AC008669.1-201ENST00000565823 2178 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.37□□□□□ -1.87
ATXN1P54253 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.37□□□□□ -1.87
ATXN1P54253 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.37□□□□□ -1.87
ATXN1P54253 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATXN1P54253 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 SNORD14B-201ENST00000364533 90 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 RNU6-384P-201ENST00000364900 104 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 SNORA51.11-201ENST00000384442 131 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 Y_RNA.586-201ENST00000391146 98 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ATXN1P54253 AC007560.1-201ENST00000426912 237 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 TOMM20P4-201ENST00000427861 435 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AL645568.3-201ENST00000433683 316 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.37□□□□□ -1.87
ATXN1P54253 SNRPEP9-201ENST00000436794 238 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AC087477.1-201ENST00000465747 340 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.37□□□□□ -1.87
ATXN1P54253 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.37□□□□□ -1.87
ATXN1P54253 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.37□□□□□ -1.87
ATXN1P54253 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.37□□□□□ -1.87
ATXN1P54253 AC123912.5-201ENST00000605470 343 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AL161423.1-201ENST00000613700 262 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AL159153.1-201ENST00000619688 317 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 AC018692.3-201ENST00000623929 123 ntBASIC3.37□□□□□ -1.87
ATXN1P54253 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
ATXN1P54253 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATXN1P54253 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATXN1P54253 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATXN1P54253 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATXN1P54253 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATXN1P54253 MIR335-201ENST00000362173 94 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 SNORA54-201ENST00000384281 123 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 Y_RNA.497-201ENST00000384447 98 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 MIR186-201ENST00000384988 86 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 MIR10A-201ENST00000385043 110 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 SNORA40C-201ENST00000391285 128 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 MIR888-201ENST00000401186 77 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 AL627311.1-201ENST00000431514 115 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 SNORD5.1-201ENST00000458800 75 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 RNU7-187P-201ENST00000458985 68 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 RNA5SP356-201ENST00000515972 94 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 SNORA40.14-201ENST00000516543 86 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 RNU6-572P-201ENST00000516724 80 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 SCARNA24.2-201ENST00000516968 130 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.36□□□□□ -1.87
ATXN1P54253 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.36□□□□□ -1.87
ATXN1P54253 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATXN1P54253 MRPS18CP4-201ENST00000535821 231 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.36□□□□□ -1.87
ATXN1P54253 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.36□□□□□ -1.87
ATXN1P54253 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.36□□□□□ -1.87
ATXN1P54253 AL138825.1-201ENST00000618587 192 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 AC099654.7-201ENST00000635788 2127 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATXN1P54253 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
ATXN1P54253 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.36□□□□□ -1.87
ATXN1P54253 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ATXN1P54253 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATXN1P54253 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ATXN1P54253 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATXN1P54253 RNU6-884P-201ENST00000363889 107 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 MIR767-201ENST00000390228 109 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ATXN1P54253 RNU2-52P-201ENST00000410680 190 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 RNU6-651P-201ENST00000411040 105 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 Y_RNA.626-201ENST00000411288 95 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
ATXN1P54253 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATXN1P54253 AL353997.1-201ENST00000432936 108 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AL078601.1-201ENST00000444542 271 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATXN1P54253 RPL26P9-201ENST00000457466 433 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AC091179.1-201ENST00000461606 579 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 RPL9P9-202ENST00000466501 579 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.35□□□□□ -1.87
ATXN1P54253 AC018437.1-201ENST00000492214 406 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms