Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 APOOP3-201ENST00000536787 586 ntBASIC0.23□□□□□ -2.37
SRP9P49458 MIR3146-201ENST00000580367 79 ntBASIC0.23□□□□□ -2.37
SRP9P49458 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.23□□□□□ -2.37
SRP9P49458 KC877982.1-201ENST00000602313 470 ntBASIC0.23□□□□□ -2.37
SRP9P49458 CTHRC1P1-201ENST00000605383 469 ntBASIC0.23□□□□□ -2.37
SRP9P49458 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.23□□□□□ -2.37
SRP9P49458 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.23□□□□□ -2.37
SRP9P49458 AC026585.1-201ENST00000619582 524 ntBASIC0.23□□□□□ -2.37
SRP9P49458 AC106754.2-201ENST00000623006 233 ntBASIC0.23□□□□□ -2.37
SRP9P49458 RNU6-534P-201ENST00000364877 106 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.22□□□□□ -2.37
SRP9P49458 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.22□□□□□ -2.37
SRP9P49458 RPEP5-201ENST00000441137 268 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.22□□□□□ -2.37
SRP9P49458 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
SRP9P49458 AC016925.1-201ENST00000458303 298 ntBASIC0.22□□□□□ -2.37
SRP9P49458 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.22□□□□□ -2.37
SRP9P49458 AC091435.1-201ENST00000505442 584 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AC011406.1-201ENST00000512440 370 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.22□□□□□ -2.37
SRP9P49458 AC022784.5-201ENST00000522241 437 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.22□□□□□ -2.37
SRP9P49458 AC090888.2-201ENST00000559765 1144 ntBASIC0.22□□□□□ -2.37
SRP9P49458 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.22□□□□□ -2.37
SRP9P49458 AC080078.2-201ENST00000603766 501 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.22□□□□□ -2.37
SRP9P49458 AC009509.4-201ENST00000619202 509 ntBASIC0.22□□□□□ -2.37
SRP9P49458 RMST_7.1-201ENST00000621935 268 ntBASIC0.22□□□□□ -2.37
SRP9P49458 AC004808.1-201ENST00000627671 721 ntBASIC0.22□□□□□ -2.37
SRP9P49458 RNU6-527P-201ENST00000363425 104 ntBASIC0.21□□□□□ -2.38
SRP9P49458 RNY3P13-201ENST00000365542 102 ntBASIC0.21□□□□□ -2.38
SRP9P49458 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
SRP9P49458 RNU6-342P-201ENST00000384521 104 ntBASIC0.21□□□□□ -2.38
SRP9P49458 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
SRP9P49458 Y_RNA.578-201ENST00000390903 88 ntBASIC0.21□□□□□ -2.38
SRP9P49458 RNU4-22P-201ENST00000411058 166 ntBASIC0.21□□□□□ -2.38
SRP9P49458 C1DP2-201ENST00000418167 426 ntBASIC0.21□□□□□ -2.38
SRP9P49458 MTND4P20-201ENST00000424125 869 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC010154.1-201ENST00000425857 269 ntBASIC0.21□□□□□ -2.38
SRP9P49458 RPL23AP30-201ENST00000432419 501 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AL031313.1-201ENST00000448435 256 ntBASIC0.21□□□□□ -2.38
SRP9P49458 GAPDHP17-201ENST00000449858 1001 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC007395.1-201ENST00000451333 677 ntBASIC0.21□□□□□ -2.38
SRP9P49458 C1DP4-201ENST00000455429 424 ntBASIC0.21□□□□□ -2.38
SRP9P49458 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.21□□□□□ -2.38
SRP9P49458 AC113410.1-201ENST00000505029 247 ntBASIC0.21□□□□□ -2.38
SRP9P49458 RNU5F-4P-201ENST00000516581 114 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC092451.2-201ENST00000538746 658 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC087883.1-201ENST00000551882 391 ntBASIC0.21□□□□□ -2.38
SRP9P49458 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC174048.1-201ENST00000603389 144 ntBASIC0.21□□□□□ -2.38
SRP9P49458 MIR98-201ENST00000606724 119 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC116165.2-201ENST00000616705 206 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC136475.10-201ENST00000620253 385 ntBASIC0.21□□□□□ -2.38
SRP9P49458 PVT1_3.1-201ENST00000620853 95 ntBASIC0.21□□□□□ -2.38
SRP9P49458 Z69720.2-201ENST00000624755 279 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC010487.4-201ENST00000637027 61 ntBASIC0.21□□□□□ -2.38
SRP9P49458 AC006927.2-201ENST00000639256 389 ntBASIC0.21□□□□□ -2.38
SRP9P49458 RNU5E-6P-201ENST00000365574 115 ntBASIC0.2□□□□□ -2.38
SRP9P49458 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
SRP9P49458 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SRP9P49458 RNA5SP109-201ENST00000391010 116 ntBASIC0.2□□□□□ -2.38
SRP9P49458 SNORD99-201ENST00000408612 74 ntBASIC0.2□□□□□ -2.38
SRP9P49458 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.2□□□□□ -2.38
SRP9P49458 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.2□□□□□ -2.38
SRP9P49458 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.2□□□□□ -2.38
SRP9P49458 RNU6-856P-201ENST00000516959 98 ntBASIC0.2□□□□□ -2.38
SRP9P49458 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.2□□□□□ -2.38
SRP9P49458 AP002453.2-201ENST00000533503 320 ntBASIC0.2□□□□□ -2.38
SRP9P49458 RN7SL793P-201ENST00000583259 296 ntBASIC0.2□□□□□ -2.38
SRP9P49458 MIR548AC-201ENST00000585049 88 ntBASIC0.2□□□□□ -2.38
SRP9P49458 AL606834.3-201ENST00000602615 496 ntBASIC0.2□□□□□ -2.38
SRP9P49458 AL513534.2-201ENST00000603836 250 ntBASIC0.2□□□□□ -2.38
SRP9P49458 AC012557.2-201ENST00000605919 418 ntBASIC0.2□□□□□ -2.38
SRP9P49458 FRG1KP-201ENST00000623592 341 ntBASIC0.2□□□□□ -2.38
SRP9P49458 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RNU6-609P-201ENST00000365459 107 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RNU6-142P-201ENST00000384019 107 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RNU6-418P-201ENST00000384035 107 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RNU6-505P-201ENST00000384427 107 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RNU6-1026P-201ENST00000384465 108 ntBASIC0.19□□□□□ -2.38
SRP9P49458 MIR578-201ENST00000384828 96 ntBASIC0.19□□□□□ -2.38
SRP9P49458 MIR489-201ENST00000384923 84 ntBASIC0.19□□□□□ -2.38
SRP9P49458 MIR613-201ENST00000385248 95 ntBASIC0.19□□□□□ -2.38
SRP9P49458 SNORA40.2-201ENST00000390847 128 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RN7SKP266-201ENST00000410232 287 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RNA5SP511-201ENST00000410487 115 ntBASIC0.19□□□□□ -2.38
SRP9P49458 UBE2D3P3-201ENST00000426992 425 ntBASIC0.19□□□□□ -2.38
SRP9P49458 RSL24D1P8-201ENST00000434442 492 ntBASIC0.19□□□□□ -2.38
SRP9P49458 AC233266.1-201ENST00000454518 96 ntBASIC0.19□□□□□ -2.38
SRP9P49458 AC022447.4-201ENST00000504053 364 ntBASIC0.19□□□□□ -2.38
SRP9P49458 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.19□□□□□ -2.38
SRP9P49458 SNORA68.3-201ENST00000515906 83 ntBASIC0.19□□□□□ -2.38
SRP9P49458 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.19□□□□□ -2.38
SRP9P49458 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.19□□□□□ -2.38
SRP9P49458 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.19□□□□□ -2.38
SRP9P49458 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.19□□□□□ -2.38
SRP9P49458 AL158032.1-201ENST00000605401 106 ntBASIC0.19□□□□□ -2.38
SRP9P49458 GHRLOS.1-201ENST00000610995 70 ntBASIC0.19□□□□□ -2.38
SRP9P49458 AC242852.1-201ENST00000612151 96 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms