Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.02□□□□□ -2.09
BRCC3P46736 AC060780.3-201ENST00000589464 80 ntBASIC2.02□□□□□ -2.09
BRCC3P46736 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.02□□□□□ -2.09
BRCC3P46736 AC073410.2-201ENST00000603240 332 ntBASIC2.02□□□□□ -2.09
BRCC3P46736 uc_338.15-201ENST00000615470 191 ntBASIC2.02□□□□□ -2.09
BRCC3P46736 AL159153.1-201ENST00000619688 317 ntBASIC2.02□□□□□ -2.09
BRCC3P46736 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.02□□□□□ -2.09
BRCC3P46736 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
BRCC3P46736 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
BRCC3P46736 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
BRCC3P46736 CASC19-280ENST00000642102 1351 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
BRCC3P46736 Y_RNA.100-201ENST00000363141 102 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 Y_RNA.414-201ENST00000384011 101 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 RNU6-1032P-201ENST00000384100 107 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 MIR186-201ENST00000384988 86 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AIMP1P2-201ENST00000425294 312 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.01□□□□□ -2.09
BRCC3P46736 AL591043.1-201ENST00000432461 424 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.01□□□□□ -2.09
BRCC3P46736 AL359672.1-201ENST00000442302 409 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 MTND1P11-201ENST00000456661 876 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.01□□□□□ -2.09
BRCC3P46736 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AC140059.1-201ENST00000489238 361 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AC018710.1-201ENST00000506509 158 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 RNU4-49P-201ENST00000516080 140 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 CBX3P7-201ENST00000532876 502 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 TRAV32-201ENST00000553993 340 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 SCOCP1-201ENST00000554676 349 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.01□□□□□ -2.09
BRCC3P46736 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.01□□□□□ -2.09
BRCC3P46736 AC018638.8-201ENST00000588755 281 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AL138726.1-201ENST00000614873 333 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
BRCC3P46736 AC008121.3-201ENST00000618726 433 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 AL133216.2-202ENST00000634512 349 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
BRCC3P46736 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
BRCC3P46736 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
BRCC3P46736 RNU6-1159P-201ENST00000362933 107 ntBASIC2□□□□□ -2.09
BRCC3P46736 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
BRCC3P46736 Y_RNA.157-201ENST00000363638 102 ntBASIC2□□□□□ -2.09
BRCC3P46736 SNORD32A-201ENST00000364805 84 ntBASIC2□□□□□ -2.09
BRCC3P46736 Y_RNA.301-201ENST00000364990 103 ntBASIC2□□□□□ -2.09
BRCC3P46736 Y_RNA.530-201ENST00000384587 101 ntBASIC2□□□□□ -2.09
BRCC3P46736 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
BRCC3P46736 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
BRCC3P46736 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2□□□□□ -2.09
BRCC3P46736 SNAP23P1-201ENST00000433229 246 ntBASIC2□□□□□ -2.09
BRCC3P46736 MTCO2P3-201ENST00000442543 421 ntBASIC2□□□□□ -2.09
BRCC3P46736 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2□□□□□ -2.09
BRCC3P46736 AC068781.1-201ENST00000488231 618 ntBASIC2□□□□□ -2.09
BRCC3P46736 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
BRCC3P46736 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2□□□□□ -2.09
BRCC3P46736 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2□□□□□ -2.09
BRCC3P46736 RNU6-256P-201ENST00000516747 97 ntBASIC2□□□□□ -2.09
BRCC3P46736 RNU6-273P-201ENST00000516937 96 ntBASIC2□□□□□ -2.09
BRCC3P46736 AC109479.2-201ENST00000517842 174 ntBASIC2□□□□□ -2.09
BRCC3P46736 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2□□□□□ -2.09
BRCC3P46736 CYCSP26-201ENST00000534107 320 ntBASIC2□□□□□ -2.09
BRCC3P46736 IMMP1LP2-201ENST00000552954 492 ntBASIC2□□□□□ -2.09
BRCC3P46736 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2□□□□□ -2.09
BRCC3P46736 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
BRCC3P46736 AC009248.2-201ENST00000619826 254 ntBASIC2□□□□□ -2.09
BRCC3P46736 AP006437.1-201ENST00000641440 3685 ntBASIC2□□□□□ -2.09
BRCC3P46736 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BRCC3P46736 MTND4P1-201ENST00000457501 1466 ntBASIC2□□□□□ -2.09
BRCC3P46736 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
BRCC3P46736 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
BRCC3P46736 SNORD113-7-201ENST00000363762 77 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 Y_RNA.212-201ENST00000364177 102 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 MT-TL1-201ENST00000386347 75 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 AL356776.1-201ENST00000406574 447 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 RNA5SP118-201ENST00000410385 109 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.99□□□□□ -2.09
BRCC3P46736 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.99□□□□□ -2.09
BRCC3P46736 RPL39P29-201ENST00000447779 157 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 AL353752.1-201ENST00000454946 260 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.99□□□□□ -2.09
BRCC3P46736 RNU7-187P-201ENST00000458985 68 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 RPS29P27-201ENST00000463711 170 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 TRBVA-201ENST00000498804 316 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 RNU6-864P-201ENST00000516256 108 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 RNU2-53P-201ENST00000516257 147 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.99□□□□□ -2.09
BRCC3P46736 AC118273.2-201ENST00000532092 465 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.99□□□□□ -2.09
BRCC3P46736 RPL30P11-203ENST00000598995 310 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 AL355297.2-201ENST00000604792 129 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
BRCC3P46736 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
BRCC3P46736 MTND4P23-201ENST00000447723 1363 ntBASIC1.98□□□□□ -2.09
BRCC3P46736 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms