Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.34□□□□□ -2.03
ACTN2P35609 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTN2P35609 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ACTN2P35609 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
ACTN2P35609 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTN2P35609 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
ACTN2P35609 uc_338.20-201ENST00000621563 178 ntBASIC2.34□□□□□ -2.03
ACTN2P35609 AL450472.1-202ENST00000637286 180 ntBASIC2.34□□□□□ -2.03
ACTN2P35609 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ACTN2P35609 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 RNA5SP99-201ENST00000364020 114 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 SNORD14D-201ENST00000384390 87 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 Y_RNA.504-201ENST00000384481 104 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 MIR518A2-201ENST00000384966 87 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 AL589823.1-201ENST00000429577 183 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 MRPS10P2-201ENST00000431226 381 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 RPS29P27-201ENST00000463711 170 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 RPL9P9-202ENST00000466501 579 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.33□□□□□ -2.04
ACTN2P35609 PTP4A1P4-201ENST00000512479 322 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 Y_RNA.665-201ENST00000516177 98 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 AC078795.3-201ENST00000602913 472 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 FAM157A-202ENST00000615155 405 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 SNORA43.4-201ENST00000629559 138 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 AC009541.1-201ENST00000438279 2662 ntBASIC2.33□□□□□ -2.04
ACTN2P35609 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ACTN2P35609 Y_RNA.38-201ENST00000362617 102 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 RNU6-254P-201ENST00000363377 107 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 U3.9-201ENST00000363823 204 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 RNU6-26P-201ENST00000383985 107 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ACTN2P35609 MIR450B-201ENST00000401182 78 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 AL357139.1-201ENST00000407792 426 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTN2P35609 ZNF885P-201ENST00000420174 1098 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 AL645568.3-201ENST00000433683 316 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTN2P35609 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTN2P35609 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ACTN2P35609 RPL23AP42-201ENST00000471152 471 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 AC083904.1-201ENST00000487828 231 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 MTCO1P29-201ENST00000496868 288 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 AC092436.3-201ENST00000511788 257 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 RNU1-40P-201ENST00000516816 164 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 RNU1-97P-201ENST00000516872 164 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 RNA5SP364-201ENST00000516938 78 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.32□□□□□ -2.04
ACTN2P35609 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTN2P35609 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.32□□□□□ -2.04
ACTN2P35609 Z98751.3-201ENST00000604447 521 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 PCGEM1.1-201ENST00000613431 131 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 AC098657.3-201ENST00000620434 263 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 MIR6132-201ENST00000622083 109 ntBASIC2.32□□□□□ -2.04
ACTN2P35609 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
ACTN2P35609 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
ACTN2P35609 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTN2P35609 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTN2P35609 Y_RNA.450-201ENST00000384198 113 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 RNA5SP465-201ENST00000391195 109 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 RNA5SP118-201ENST00000410385 109 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.31□□□□□ -2.04
ACTN2P35609 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.31□□□□□ -2.04
ACTN2P35609 AL021397.1-201ENST00000451806 248 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.31□□□□□ -2.04
ACTN2P35609 AC091874.1-201ENST00000511402 339 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 RNU6-965P-201ENST00000516721 96 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 AC104576.1-201ENST00000524225 88 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.31□□□□□ -2.04
ACTN2P35609 AC026371.1-201ENST00000551867 419 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 CPDP1-201ENST00000579660 283 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 MIR3935-201ENST00000583472 104 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 AL078605.1-201ENST00000603529 500 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.31□□□□□ -2.04
ACTN2P35609 AC068944.2-201ENST00000610373 403 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 MIR1248-201ENST00000629190 106 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 AC068137.4-201ENST00000638485 296 ntBASIC2.31□□□□□ -2.04
ACTN2P35609 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTN2P35609 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.31□□□□□ -2.04
ACTN2P35609 Y_RNA.238-201ENST00000364441 102 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 MIR1262-201ENST00000408276 93 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 RNA5SP247-201ENST00000411181 105 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 AC012306.1-201ENST00000423267 114 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.3□□□□□ -2.04
ACTN2P35609 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.3□□□□□ -2.04
ACTN2P35609 MTND2P29-201ENST00000438595 412 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.3□□□□□ -2.04
ACTN2P35609 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.3□□□□□ -2.04
ACTN2P35609 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.3□□□□□ -2.04
ACTN2P35609 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 MTND1P35-201ENST00000526739 508 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 EIF4A1P12-201ENST00000551910 141 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 AC026464.5-201ENST00000562497 722 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.3□□□□□ -2.04
ACTN2P35609 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
ACTN2P35609 AC104458.1-201ENST00000608243 463 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms