Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RPL39P5-202ENST00000512505 151 ntBASIC1.97□□□□□ -2.09
RPA1P27694 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.97□□□□□ -2.09
RPA1P27694 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA1P27694 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA1P27694 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AC011494.1-201ENST00000596454 237 ntBASIC1.97□□□□□ -2.09
RPA1P27694 VN1R80P-201ENST00000597126 338 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AC018889.1-201ENST00000605372 397 ntBASIC1.97□□□□□ -2.09
RPA1P27694 RNU6-89P-201ENST00000606519 100 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AL121757.2-201ENST00000611223 313 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AP000560.1-201ENST00000624150 1937 ntBASIC1.96□□□□□ -2.1
RPA1P27694 RNU6-428P-201ENST00000362942 107 ntBASIC1.96□□□□□ -2.1
RPA1P27694 Y_RNA.89-201ENST00000363031 102 ntBASIC1.96□□□□□ -2.1
RPA1P27694 RNY4P14-201ENST00000363656 96 ntBASIC1.96□□□□□ -2.1
RPA1P27694 RNU6-105P-201ENST00000363909 104 ntBASIC1.96□□□□□ -2.1
RPA1P27694 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RPA1P27694 RNA5SP219-201ENST00000390940 113 ntBASIC1.96□□□□□ -2.1
RPA1P27694 RNU6-332P-201ENST00000391193 108 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AL030996.1-201ENST00000411430 235 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 AC244636.1-201ENST00000421152 228 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AL645568.3-201ENST00000433683 316 ntBASIC1.96□□□□□ -2.1
RPA1P27694 IFNA20P-201ENST00000436840 528 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.96□□□□□ -2.1
RPA1P27694 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
RPA1P27694 MTCYBP18-201ENST00000501056 747 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 MTND1P5-201ENST00000517906 940 ntBASIC1.96□□□□□ -2.1
RPA1P27694 MTND4LP26-201ENST00000518144 282 ntBASIC1.96□□□□□ -2.1
RPA1P27694 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 AC023050.3-201ENST00000541142 333 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
RPA1P27694 MIR3136-201ENST00000583498 78 ntBASIC1.96□□□□□ -2.1
RPA1P27694 BNIP3P16-201ENST00000589779 534 ntBASIC1.96□□□□□ -2.1
RPA1P27694 BNIP3P25-201ENST00000596023 559 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA1P27694 AP000907.4-201ENST00000604143 237 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC092807.2-201ENST00000609367 243 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC022418.1-201ENST00000624118 445 ntBASIC1.96□□□□□ -2.1
RPA1P27694 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.96□□□□□ -2.1
RPA1P27694 FER-210ENST00000628534 558 ntTSL 5 BASIC1.96□□□□□ -2.1
RPA1P27694 AC241585.2-209ENST00000638217 143 ntBASIC1.96□□□□□ -2.1
RPA1P27694 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.96□□□□□ -2.1
RPA1P27694 snoU2_19.1-201ENST00000362361 80 ntBASIC1.95□□□□□ -2.1
RPA1P27694 RNU6-1252P-201ENST00000363054 104 ntBASIC1.95□□□□□ -2.1
RPA1P27694 Y_RNA.99-201ENST00000363138 105 ntBASIC1.95□□□□□ -2.1
RPA1P27694 RNY3P3-201ENST00000363816 102 ntBASIC1.95□□□□□ -2.1
RPA1P27694 RNU6-266P-201ENST00000364225 107 ntBASIC1.95□□□□□ -2.1
RPA1P27694 MIR544A-201ENST00000384855 91 ntBASIC1.95□□□□□ -2.1
RPA1P27694 MIR181A1-201ENST00000385026 110 ntBASIC1.95□□□□□ -2.1
RPA1P27694 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA1P27694 ZNF885P-201ENST00000420174 1098 ntBASIC1.95□□□□□ -2.1
RPA1P27694 MRPS10P2-201ENST00000431226 381 ntBASIC1.95□□□□□ -2.1
RPA1P27694 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.95□□□□□ -2.1
RPA1P27694 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.95□□□□□ -2.1
RPA1P27694 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.95□□□□□ -2.1
RPA1P27694 AC104564.1-201ENST00000493028 407 ntBASIC1.95□□□□□ -2.1
RPA1P27694 Y_RNA.665-201ENST00000516177 98 ntBASIC1.95□□□□□ -2.1
RPA1P27694 RNU6-250P-201ENST00000516958 103 ntBASIC1.95□□□□□ -2.1
RPA1P27694 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA1P27694 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA1P27694 AC107304.1-201ENST00000604229 296 ntBASIC1.95□□□□□ -2.1
RPA1P27694 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.95□□□□□ -2.1
RPA1P27694 RMST_6.1-201ENST00000611980 203 ntBASIC1.95□□□□□ -2.1
RPA1P27694 FAM157A-202ENST00000615155 405 ntBASIC1.95□□□□□ -2.1
RPA1P27694 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RPA1P27694 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
RPA1P27694 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA1P27694 RNU6-1285P-201ENST00000363480 105 ntBASIC1.94□□□□□ -2.1
RPA1P27694 RNU6-944P-201ENST00000364023 107 ntBASIC1.94□□□□□ -2.1
RPA1P27694 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
RPA1P27694 SNORA8-201ENST00000384574 139 ntBASIC1.94□□□□□ -2.1
RPA1P27694 Y_RNA.597-201ENST00000410463 100 ntBASIC1.94□□□□□ -2.1
RPA1P27694 RPL30P16-201ENST00000419341 429 ntBASIC1.94□□□□□ -2.1
RPA1P27694 CYCSP49-201ENST00000420810 319 ntBASIC1.94□□□□□ -2.1
RPA1P27694 AL358453.1-201ENST00000422522 250 ntBASIC1.94□□□□□ -2.1
RPA1P27694 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.94□□□□□ -2.1
RPA1P27694 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.94□□□□□ -2.1
RPA1P27694 NFU1P2-201ENST00000448700 469 ntBASIC1.94□□□□□ -2.1
RPA1P27694 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.94□□□□□ -2.1
RPA1P27694 RNU7-66P-201ENST00000459469 62 ntBASIC1.94□□□□□ -2.1
RPA1P27694 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.94□□□□□ -2.1
RPA1P27694 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA1P27694 MTND4P7-201ENST00000523876 130 ntBASIC1.94□□□□□ -2.1
RPA1P27694 COPS8P3-201ENST00000526024 482 ntBASIC1.94□□□□□ -2.1
RPA1P27694 CENPUP1-201ENST00000526649 1202 ntBASIC1.94□□□□□ -2.1
RPA1P27694 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RPA1P27694 AL162413.1-201ENST00000603198 110 ntBASIC1.94□□□□□ -2.1
RPA1P27694 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
RPA1P27694 AC092747.3-201ENST00000603769 301 ntBASIC1.94□□□□□ -2.1
RPA1P27694 AC090617.10-201ENST00000624308 134 ntBASIC1.94□□□□□ -2.1
RPA1P27694 OR4G1P-203ENST00000641984 1631 ntBASIC1.94□□□□□ -2.1
RPA1P27694 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RPA1P27694 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
RPA1P27694 Y_RNA.6-201ENST00000362350 114 ntBASIC1.93□□□□□ -2.1
RPA1P27694 RNU1-58P-201ENST00000362413 163 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms