Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPA1P20036 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC010409.1-201ENST00000487382 476 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 HMGB1P29-201ENST00000505659 499 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPA1P20036 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC090517.1-201ENST00000569307 266 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC087683.1-201ENST00000591187 441 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC011494.1-201ENST00000596454 237 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 SNORA43.4-201ENST00000629559 138 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC009541.1-201ENST00000438279 2662 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DPA1P20036 MIR340-201ENST00000362125 95 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 Y_RNA.553-201ENST00000384670 102 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 SNORA12.2-201ENST00000391040 156 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AL353193.1-201ENST00000421444 268 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AC012306.1-201ENST00000423267 114 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AL591806.2-201ENST00000433122 173 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AL606489.2-201ENST00000433886 234 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DPA1P20036 MTCO1P19-201ENST00000443487 500 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 RNU6-1037P-201ENST00000459571 107 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AC007547.1-201ENST00000462177 490 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 RPL23AP63-201ENST00000498752 471 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AC097473.1-201ENST00000508142 408 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 SNORA14.1-201ENST00000516113 141 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AK6P1-201ENST00000540219 478 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPA1P20036 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 MIR5094-201ENST00000578766 85 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPA1P20036 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 VN1R80P-201ENST00000597126 338 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AC064807.4-201ENST00000607201 407 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AL136221.1-201ENST00000621449 509 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 AC022513.1-201ENST00000624512 117 ntBASIC1.8□□□□□ -2.12
HLA-DPA1P20036 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 MIR424-201ENST00000362227 98 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 MIR126-201ENST00000362291 85 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 SNORD31B-201ENST00000364977 69 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 RNU6-1026P-201ENST00000384465 108 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 SNORD37.1-201ENST00000390968 65 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 MTCO3P46-201ENST00000425787 232 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 RPL7P54-201ENST00000438336 674 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 AC112492.4-201ENST00000456549 352 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 AC021146.2-201ENST00000504736 556 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 FAM206BP-201ENST00000510179 541 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 RPL39P5-202ENST00000512505 151 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 DEFB122-202ENST00000569013 197 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 MIR4424-201ENST00000585257 86 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 AC016925.2-201ENST00000605108 242 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 RPL17P51-201ENST00000605218 238 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 AC005520.5-201ENST00000613926 164 ntBASIC1.79□□□□□ -2.12
HLA-DPA1P20036 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DPA1P20036 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 RNU6-439P-201ENST00000384188 106 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 SNORA26.9-201ENST00000391322 122 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 TPTE2P5-203ENST00000458118 728 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 snoU13.23-201ENST00000458863 104 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 MTCO3P38-201ENST00000468910 766 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 RPS23P5-201ENST00000495419 428 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC010424.1-201ENST00000506336 297 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC108078.1-201ENST00000508073 725 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 RNU6-189P-201ENST00000516120 101 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 RNU6-548P-201ENST00000517083 115 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC006362.1-201ENST00000567392 174 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AC009994.1-201ENST00000606889 253 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.78□□□□□ -2.12
HLA-DPA1P20036 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DPA1P20036 AP000568.1-201ENST00000282964 442 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 Y_RNA.77-201ENST00000362962 107 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 RNU4-42P-201ENST00000364738 142 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms