Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 AC002543.1-201ENST00000299783 1954 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXD8P13378 AC004944.1-201ENST00000517807 3059 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HOXD8P13378 RNU6-799P-201ENST00000363567 107 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 RNU6-763P-201ENST00000390865 106 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 RNU6-239P-201ENST00000390990 99 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 MIR513C-201ENST00000401352 84 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 AC005300.1-201ENST00000428401 373 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 AC103975.1-201ENST00000482506 483 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD8P13378 AC005921.1-201ENST00000510589 286 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXD8P13378 AC006199.1-201ENST00000548728 219 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 AC027176.1-201ENST00000560204 514 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 MIR3923-201ENST00000579521 83 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 MIR548X2-201ENST00000579776 100 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 MIR3136-201ENST00000583498 78 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 MIR5195-201ENST00000583555 115 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.1□□□□□ -1.75
HOXD8P13378 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD8P13378 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD8P13378 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD8P13378 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD8P13378 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXD8P13378 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HOXD8P13378 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HOXD8P13378 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXD8P13378 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD8P13378 Y_RNA.293-201ENST00000364908 93 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 RNU6-487P-201ENST00000365430 104 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 MIR569-201ENST00000385228 96 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 SNORA40-201ENST00000388090 126 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 U3.40-201ENST00000408706 208 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 RNU6-257P-201ENST00000410238 98 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 EBAG9P1-201ENST00000418955 543 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXD8P13378 AIG1P1-201ENST00000503376 148 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 SNORA25.12-201ENST00000516202 82 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 AC100767.1-201ENST00000528178 123 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD8P13378 AC005000.2-201ENST00000605468 310 ntBASIC4.09□□□□□ -1.75
HOXD8P13378 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD8P13378 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD8P13378 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD8P13378 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD8P13378 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD8P13378 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HOXD8P13378 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD8P13378 RNU6-1264P-201ENST00000383891 107 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 Y_RNA.415-201ENST00000384012 112 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 MIR490-201ENST00000384865 128 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 RPL30P13-201ENST00000418873 348 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD8P13378 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD8P13378 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXD8P13378 U8.19-201ENST00000459095 133 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 Y_RNA.637-201ENST00000459424 114 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD8P13378 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD8P13378 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD8P13378 AC023141.12-201ENST00000512399 199 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 RN7SKP164-201ENST00000516138 266 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 RN7SKP289-201ENST00000517244 295 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 AP002001.1-203ENST00000534002 267 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 AL359881.1-201ENST00000602916 267 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 AC073073.2-201ENST00000609827 2578 ntBASIC4.08□□□□□ -1.76
HOXD8P13378 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD8P13378 AC010332.2-201ENST00000613083 1904 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HOXD8P13378 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HOXD8P13378 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD8P13378 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD8P13378 RNU6-199P-201ENST00000362954 107 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 RNU6-818P-201ENST00000364837 108 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 RNU4-11P-201ENST00000365287 132 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 RNU6-622P-201ENST00000384272 103 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 RNVU1-14-201ENST00000384770 164 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD8P13378 AL161651.1-201ENST00000440882 223 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 AC008155.2-201ENST00000464337 397 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 AC107027.2-201ENST00000512197 115 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD8P13378 AC025946.2-201ENST00000603398 234 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 AC069294.1-201ENST00000608397 350 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 MIR4727-201ENST00000622232 55 ntBASIC4.07□□□□□ -1.76
HOXD8P13378 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXD8P13378 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD8P13378 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HOXD8P13378 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXD8P13378 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD8P13378 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD8P13378 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXD8P13378 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms