Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC087477.1-201ENST00000465747 340 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 RPS29P2-201ENST00000479278 136 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AF186996.7-201ENST00000492781 209 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AC091874.1-201ENST00000511402 339 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 RN7SKP43-201ENST00000516173 320 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 RN7SKP272-201ENST00000516988 232 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AC093331.1-201ENST00000521474 169 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 CKS1BP7-201ENST00000522230 235 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AC136932.1-201ENST00000574771 208 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AC009163.5-201ENST00000575421 637 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 MIR5571-201ENST00000577998 113 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AC240442.1-201ENST00000616055 283 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 MIR376A1-201ENST00000616574 68 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 SNORA43.4-201ENST00000629559 138 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAMP4O75379 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.79□□□□□ -1.8
VAMP4O75379 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VAMP4O75379 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.79□□□□□ -1.8
VAMP4O75379 RNU6-1141P-201ENST00000364520 107 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 Y_RNA.416-201ENST00000384014 113 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 MIR215-201ENST00000384858 110 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VAMP4O75379 RNA5SP274-201ENST00000410484 108 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AC078809.1-201ENST00000427601 140 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AL139132.1-201ENST00000431587 344 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AL590664.1-201ENST00000448065 339 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 UQCRHP3-201ENST00000451503 251 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP4O75379 RNA5SP310-201ENST00000459084 116 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 RN7SL633P-201ENST00000488974 297 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.79□□□□□ -1.8
VAMP4O75379 AC006445.2-201ENST00000510061 472 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 Y_RNA.673-201ENST00000516306 88 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AC007375.1-201ENST00000554513 578 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AL391261.3-201ENST00000557194 520 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP4O75379 MIR4300-201ENST00000581016 96 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 MIR3609-201ENST00000582661 80 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 MIR3529-201ENST00000637713 78 ntBASIC3.79□□□□□ -1.8
VAMP4O75379 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.79□□□□□ -1.8
VAMP4O75379 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VAMP4O75379 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VAMP4O75379 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.78□□□□□ -1.8
VAMP4O75379 AL391987.6-201ENST00000305671 199 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 Y_RNA.477-201ENST00000384352 108 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 RNU6-843P-201ENST00000384454 104 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 MIR23A-201ENST00000385245 73 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 RN7SKP61-201ENST00000410642 295 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.78□□□□□ -1.8
VAMP4O75379 RPS27P29-201ENST00000463110 252 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 RPS29P20-201ENST00000489592 171 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 AC022868.1-201ENST00000517767 391 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 AC073410.2-201ENST00000603240 332 ntBASIC3.78□□□□□ -1.8
VAMP4O75379 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAMP4O75379 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.78□□□□□ -1.8
VAMP4O75379 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.81
VAMP4O75379 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP4O75379 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP4O75379 GABRG2-229ENST00000641017 3628 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 Y_RNA.143-201ENST00000363520 106 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 RNU6-487P-201ENST00000365430 104 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 MIR544A-201ENST00000384855 91 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 RPS4XP3-201ENST00000398541 413 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 UBA52P6-201ENST00000399822 382 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 AL079342.1-201ENST00000401460 267 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 RNA5SP390-201ENST00000410191 113 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.77□□□□□ -1.81
VAMP4O75379 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.77□□□□□ -1.81
VAMP4O75379 MED28P2-201ENST00000475771 317 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 AP001025.1-201ENST00000486139 332 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 AC016632.1-201ENST00000503994 196 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 SNORA31.1-201ENST00000515993 133 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 RNU6-1114P-201ENST00000516022 107 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 SNORA31.5-201ENST00000516190 133 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 MIR4659A-201ENST00000580269 81 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 AL033523.1-201ENST00000605153 153 ntBASIC3.77□□□□□ -1.81
VAMP4O75379 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VAMP4O75379 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP4O75379 AL079305.1-201ENST00000623159 3008 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VAMP4O75379 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAMP4O75379 RNU6-858P-201ENST00000362436 107 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 RNU6-222P-201ENST00000362438 107 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 RNU1-140P-201ENST00000365040 165 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 MIR483-201ENST00000385070 76 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 Y_RNA.581-201ENST00000391017 97 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 SNORD58.1-201ENST00000391313 66 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 MIR548I3-201ENST00000408378 149 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 MIR548I1-201ENST00000408810 149 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.76□□□□□ -1.81
VAMP4O75379 AL590135.1-201ENST00000422215 156 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.76□□□□□ -1.81
VAMP4O75379 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.76□□□□□ -1.81
VAMP4O75379 RNU6-581P-201ENST00000516214 105 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 RNU6-1198P-201ENST00000516904 67 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.76□□□□□ -1.81
VAMP4O75379 HSPE1P7-201ENST00000604681 321 ntBASIC3.76□□□□□ -1.81
VAMP4O75379 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.76□□□□□ -1.81
VAMP4O75379 MIR6076-201ENST00000617521 113 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms