Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL355796.1-201ENST00000406706 323 ntBASIC4.79□□□□□ -1.64
RNF40O75150 RNU6-592P-201ENST00000411333 103 ntBASIC4.79□□□□□ -1.64
RNF40O75150 AL358232.1-201ENST00000448030 501 ntBASIC4.79□□□□□ -1.64
RNF40O75150 RPS29P2-201ENST00000479278 136 ntBASIC4.79□□□□□ -1.64
RNF40O75150 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
RNF40O75150 RNU7-116P-201ENST00000516940 62 ntBASIC4.79□□□□□ -1.64
RNF40O75150 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF40O75150 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF40O75150 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF40O75150 AC105129.1-201ENST00000560250 297 ntBASIC4.79□□□□□ -1.64
RNF40O75150 CYP4A43P-201ENST00000568156 121 ntBASIC4.79□□□□□ -1.64
RNF40O75150 AC091178.1-203ENST00000584586 279 ntBASIC4.79□□□□□ -1.64
RNF40O75150 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF40O75150 AC112484.5-201ENST00000624189 228 ntBASIC4.79□□□□□ -1.64
RNF40O75150 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
RNF40O75150 MAPK10-253ENST00000641010 4072 ntBASIC4.79□□□□□ -1.64
RNF40O75150 AL136164.3-201ENST00000624429 3978 ntBASIC4.79□□□□□ -1.64
RNF40O75150 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF40O75150 AC007496.3-201ENST00000624987 3443 ntBASIC4.78□□□□□ -1.64
RNF40O75150 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 MAPK10-304ENST00000641341 3984 ntBASIC4.78□□□□□ -1.64
RNF40O75150 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF40O75150 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF40O75150 RNA5SP125-201ENST00000364843 120 ntBASIC4.78□□□□□ -1.64
RNF40O75150 RNU6-573P-201ENST00000383938 106 ntBASIC4.78□□□□□ -1.64
RNF40O75150 CALM2P4-201ENST00000430810 426 ntBASIC4.78□□□□□ -1.64
RNF40O75150 AL445584.1-201ENST00000431451 330 ntBASIC4.78□□□□□ -1.64
RNF40O75150 NDUFB1P1-201ENST00000435191 180 ntBASIC4.78□□□□□ -1.64
RNF40O75150 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF40O75150 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF40O75150 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF40O75150 RNU6-94P-201ENST00000607728 107 ntBASIC4.78□□□□□ -1.64
RNF40O75150 AL138721.1-201ENST00000616756 179 ntBASIC4.78□□□□□ -1.64
RNF40O75150 AC011944.2-201ENST00000624440 683 ntBASIC4.78□□□□□ -1.64
RNF40O75150 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF40O75150 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF40O75150 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RNF40O75150 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF40O75150 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF40O75150 AC011266.1-201ENST00000624119 3569 ntBASIC4.77□□□□□ -1.65
RNF40O75150 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 RNU4-41P-201ENST00000364426 143 ntBASIC4.77□□□□□ -1.65
RNF40O75150 Y_RNA.634-201ENST00000364811 113 ntBASIC4.77□□□□□ -1.65
RNF40O75150 MIR570-201ENST00000384917 97 ntBASIC4.77□□□□□ -1.65
RNF40O75150 MIR624-201ENST00000385217 97 ntBASIC4.77□□□□□ -1.65
RNF40O75150 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.77□□□□□ -1.65
RNF40O75150 MIR1302-5-201ENST00000408164 150 ntBASIC4.77□□□□□ -1.65
RNF40O75150 AL021397.1-201ENST00000451806 248 ntBASIC4.77□□□□□ -1.65
RNF40O75150 RPL23AP54-201ENST00000495129 419 ntBASIC4.77□□□□□ -1.65
RNF40O75150 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF40O75150 SNORD77.4-201ENST00000516158 81 ntBASIC4.77□□□□□ -1.65
RNF40O75150 RNU2-44P-201ENST00000516795 194 ntBASIC4.77□□□□□ -1.65
RNF40O75150 HSPE1P5-201ENST00000561489 272 ntBASIC4.77□□□□□ -1.65
RNF40O75150 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF40O75150 MIR3939-201ENST00000582614 106 ntBASIC4.77□□□□□ -1.65
RNF40O75150 AL049861.1-201ENST00000603130 150 ntBASIC4.77□□□□□ -1.65
RNF40O75150 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF40O75150 U3.53-201ENST00000628922 216 ntBASIC4.77□□□□□ -1.65
RNF40O75150 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
RNF40O75150 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
RNF40O75150 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF40O75150 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF40O75150 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF40O75150 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 Y_RNA.323-201ENST00000365157 109 ntBASIC4.76□□□□□ -1.65
RNF40O75150 RNU6-1080P-201ENST00000383982 107 ntBASIC4.76□□□□□ -1.65
RNF40O75150 RNU1-44P-201ENST00000384453 163 ntBASIC4.76□□□□□ -1.65
RNF40O75150 RNU6-1152P-201ENST00000384576 107 ntBASIC4.76□□□□□ -1.65
RNF40O75150 AL121890.1-201ENST00000435457 205 ntBASIC4.76□□□□□ -1.65
RNF40O75150 AC026402.1-201ENST00000513642 170 ntBASIC4.76□□□□□ -1.65
RNF40O75150 RNA5SP236-201ENST00000516169 116 ntBASIC4.76□□□□□ -1.65
RNF40O75150 IGLVIV-65-201ENST00000517313 360 ntBASIC4.76□□□□□ -1.65
RNF40O75150 AP005019.3-201ENST00000620418 560 ntBASIC4.76□□□□□ -1.65
RNF40O75150 BMS1P21-201ENST00000634565 365 ntBASIC4.76□□□□□ -1.65
RNF40O75150 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
RNF40O75150 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF40O75150 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF40O75150 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF40O75150 AC125257.1-201ENST00000560400 2930 ntBASIC4.75□□□□□ -1.65
RNF40O75150 RNA5SP513-201ENST00000364648 118 ntBASIC4.75□□□□□ -1.65
RNF40O75150 RNU6-1014P-201ENST00000383940 103 ntBASIC4.75□□□□□ -1.65
RNF40O75150 Y_RNA.528-201ENST00000384575 108 ntBASIC4.75□□□□□ -1.65
RNF40O75150 Y_RNA.544-201ENST00000384650 113 ntBASIC4.75□□□□□ -1.65
RNF40O75150 RNU6-440P-201ENST00000390882 105 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms