Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 LINC00933-203ENST00000559812 219 ntBASIC3.33□□□□□ -1.88
PAX4O43316 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.33□□□□□ -1.88
PAX4O43316 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.33□□□□□ -1.88
PAX4O43316 AC005972.2-201ENST00000604690 348 ntBASIC3.33□□□□□ -1.88
PAX4O43316 AL391358.1-201ENST00000605342 190 ntBASIC3.33□□□□□ -1.88
PAX4O43316 SNORD11B-201ENST00000607707 90 ntBASIC3.33□□□□□ -1.88
PAX4O43316 AL021997.2-201ENST00000615674 271 ntBASIC3.33□□□□□ -1.88
PAX4O43316 AC087385.3-201ENST00000620477 187 ntBASIC3.33□□□□□ -1.88
PAX4O43316 U3.53-201ENST00000628922 216 ntBASIC3.33□□□□□ -1.88
PAX4O43316 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PAX4O43316 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.33□□□□□ -1.88
PAX4O43316 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PAX4O43316 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PAX4O43316 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.33□□□□□ -1.88
PAX4O43316 ZFRP1-201ENST00000457579 2970 ntBASIC3.33□□□□□ -1.88
PAX4O43316 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PAX4O43316 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PAX4O43316 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PAX4O43316 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.32□□□□□ -1.88
PAX4O43316 AC073073.2-201ENST00000609827 2578 ntBASIC3.32□□□□□ -1.88
PAX4O43316 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PAX4O43316 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.32□□□□□ -1.88
PAX4O43316 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.32□□□□□ -1.88
PAX4O43316 RNU6-600P-201ENST00000362524 99 ntBASIC3.32□□□□□ -1.88
PAX4O43316 RNA5SP191-201ENST00000362585 102 ntBASIC3.32□□□□□ -1.88
PAX4O43316 RNU6-60P-201ENST00000364792 103 ntBASIC3.32□□□□□ -1.88
PAX4O43316 SNORA71.2-201ENST00000364941 134 ntBASIC3.32□□□□□ -1.88
PAX4O43316 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
PAX4O43316 MIR298-201ENST00000401212 88 ntBASIC3.32□□□□□ -1.88
PAX4O43316 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.32□□□□□ -1.88
PAX4O43316 AC009414.1-201ENST00000427200 443 ntBASIC3.32□□□□□ -1.88
PAX4O43316 RPL23AP82-202ENST00000427528 469 ntBASIC3.32□□□□□ -1.88
PAX4O43316 AC027124.2-201ENST00000428249 105 ntBASIC3.32□□□□□ -1.88
PAX4O43316 RPS26P2-201ENST00000440331 348 ntBASIC3.32□□□□□ -1.88
PAX4O43316 RPL23AP7-203ENST00000449021 469 ntBASIC3.32□□□□□ -1.88
PAX4O43316 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
PAX4O43316 RN7SL826P-201ENST00000479724 288 ntBASIC3.32□□□□□ -1.88
PAX4O43316 AC093270.2-201ENST00000486157 792 ntBASIC3.32□□□□□ -1.88
PAX4O43316 AC113410.1-201ENST00000505029 247 ntBASIC3.32□□□□□ -1.88
PAX4O43316 SCARNA15.2-201ENST00000516409 127 ntBASIC3.32□□□□□ -1.88
PAX4O43316 AC109329.2-201ENST00000519658 482 ntBASIC3.32□□□□□ -1.88
PAX4O43316 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.32□□□□□ -1.88
PAX4O43316 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
PAX4O43316 Pinc.1-201ENST00000616452 154 ntBASIC3.32□□□□□ -1.88
PAX4O43316 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PAX4O43316 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.32□□□□□ -1.88
PAX4O43316 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PAX4O43316 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.32□□□□□ -1.88
PAX4O43316 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PAX4O43316 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PAX4O43316 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PAX4O43316 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PAX4O43316 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.31□□□□□ -1.88
PAX4O43316 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PAX4O43316 AC126755.2-208ENST00000327792 462 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AC138969.1-213ENST00000331436 462 ntBASIC3.31□□□□□ -1.88
PAX4O43316 RNA5SP502-201ENST00000362694 119 ntBASIC3.31□□□□□ -1.88
PAX4O43316 RN7SKP280-201ENST00000364196 304 ntBASIC3.31□□□□□ -1.88
PAX4O43316 Y_RNA.467-201ENST00000384297 102 ntBASIC3.31□□□□□ -1.88
PAX4O43316 Y_RNA.607-201ENST00000410597 98 ntBASIC3.31□□□□□ -1.88
PAX4O43316 RNU4-69P-201ENST00000410677 143 ntBASIC3.31□□□□□ -1.88
PAX4O43316 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.31□□□□□ -1.88
PAX4O43316 AL121890.1-201ENST00000435457 205 ntBASIC3.31□□□□□ -1.88
PAX4O43316 HMGN2P20-201ENST00000437531 273 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AL353813.1-201ENST00000440700 253 ntBASIC3.31□□□□□ -1.88
PAX4O43316 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.31□□□□□ -1.88
PAX4O43316 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.31□□□□□ -1.88
PAX4O43316 RPL7AP28-201ENST00000464513 571 ntBASIC3.31□□□□□ -1.88
PAX4O43316 RN7SL132P-201ENST00000478131 296 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AL049873.1-201ENST00000480540 376 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.31□□□□□ -1.88
PAX4O43316 RNU7-149P-201ENST00000516739 59 ntBASIC3.31□□□□□ -1.88
PAX4O43316 RNU6-1006P-201ENST00000516998 103 ntBASIC3.31□□□□□ -1.88
PAX4O43316 CR383656.8-201ENST00000549046 145 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AC025281.1-201ENST00000567026 265 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AC091042.1-201ENST00000579213 173 ntBASIC3.31□□□□□ -1.88
PAX4O43316 AC136601.2-201ENST00000604356 474 ntBASIC3.31□□□□□ -1.88
PAX4O43316 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.31□□□□□ -1.88
PAX4O43316 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.31□□□□□ -1.88
PAX4O43316 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PAX4O43316 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.31□□□□□ -1.88
PAX4O43316 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PAX4O43316 AC106871.1-201ENST00000568324 3102 ntBASIC3.3□□□□□ -1.88
PAX4O43316 MFSD8-242ENST00000641690 4199 ntBASIC3.3□□□□□ -1.88
PAX4O43316 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PAX4O43316 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.3□□□□□ -1.88
PAX4O43316 AL139811.1-201ENST00000424779 2299 ntBASIC3.3□□□□□ -1.88
PAX4O43316 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PAX4O43316 RNU1-94P-201ENST00000362627 173 ntBASIC3.3□□□□□ -1.88
PAX4O43316 RNU6-944P-201ENST00000364023 107 ntBASIC3.3□□□□□ -1.88
PAX4O43316 Y_RNA.340-201ENST00000365330 92 ntBASIC3.3□□□□□ -1.88
PAX4O43316 RNU1-64P-201ENST00000365443 163 ntBASIC3.3□□□□□ -1.88
PAX4O43316 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
PAX4O43316 AL133270.1-201ENST00000402635 279 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms