Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC130324.3-201ENST00000614165 542 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MIR548AZ-201ENST00000616567 95 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC019226.1-201ENST00000625666 515 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-819P-201ENST00000364116 107 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-1335P-201ENST00000365426 107 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-432P-201ENST00000384196 109 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 Y_RNA.494-201ENST00000384432 111 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 MIR1185-1-201ENST00000408598 86 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 COX6CP10-201ENST00000416832 224 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC016831.2-201ENST00000417179 352 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.01□□□□□ -2.41
CACNA1AO00555 MTCO3P1-205ENST00000422088 832 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.01□□□□□ -2.41
CACNA1AO00555 AC005345.1-201ENST00000431868 217 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 MTCYBP15-201ENST00000433123 1127 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 DAP3P1-201ENST00000441522 278 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.01□□□□□ -2.41
CACNA1AO00555 FCF1P6-201ENST00000456841 595 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AL162395.1-201ENST00000457882 422 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 snoU13.25-201ENST00000458945 104 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 SNORD126-201ENST00000459475 77 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 MTND2P33-201ENST00000506452 1031 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC097473.1-201ENST00000508142 408 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-390P-201ENST00000516259 103 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 MIR4637-201ENST00000582405 84 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.01□□□□□ -2.41
CACNA1AO00555 VN1R88P-201ENST00000596787 292 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC009237.15-201ENST00000610252 501 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
CACNA1AO00555 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.01□□□□□ -2.41
CACNA1AO00555 AC013476.2-201ENST00000614456 459 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC018926.1-201ENST00000616335 435 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC092634.7-201ENST00000621022 103 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 SNORA72.2-201ENST00000365028 127 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-1176P-201ENST00000390955 107 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.01□□□□□ -2.41
CACNA1AO00555 AL606923.1-201ENST00000406616 190 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AL355796.1-201ENST00000406706 323 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC096531.1-201ENST00000419107 107 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.01□□□□□ -2.41
CACNA1AO00555 MTND4P20-201ENST00000424125 869 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.01□□□□□ -2.41
CACNA1AO00555 RPL39P6-201ENST00000448289 150 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 CECR9-201ENST00000453421 199 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC114981.1-201ENST00000503897 678 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AC024589.1-201ENST00000512207 263 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 SNORA68.3-201ENST00000515906 83 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-927P-201ENST00000516199 100 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 RN7SKP12-201ENST00000516275 143 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 RNA5SP481-201ENST00000516814 122 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 RNU6-714P-201ENST00000516963 103 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 MTCO2P15-201ENST00000532655 656 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.01□□□□□ -2.41
CACNA1AO00555 AL357094.1-201ENST00000603845 844 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AL136363.2-201ENST00000604173 851 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 Z98751.3-201ENST00000604447 521 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 AP000484.1-201ENST00000620067 1252 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.01□□□□□ -2.41
CACNA1AO00555 AC119674.1-220ENST00000641502 1048 ntBASIC0.01□□□□□ -2.41
CACNA1AO00555 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MIR103A1-201ENST00000362165 78 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MIR411-201ENST00000362239 96 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MIRLET7D-201ENST00000362263 87 ntBASIC0□□□□□ -2.41
CACNA1AO00555 RNU6V-201ENST00000384105 107 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MIR548B-201ENST00000385247 97 ntBASIC0□□□□□ -2.41
CACNA1AO00555 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0□□□□□ -2.41
CACNA1AO00555 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0□□□□□ -2.41
CACNA1AO00555 AL669831.1-202ENST00000428504 417 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MTND2P5-201ENST00000432656 1006 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MTND2P21-201ENST00000436242 1042 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MTCO3P18-201ENST00000440206 761 ntBASIC0□□□□□ -2.41
CACNA1AO00555 MTND4P25-201ENST00000441039 533 ntBASIC0□□□□□ -2.41
CACNA1AO00555 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0□□□□□ -2.41
CACNA1AO00555 RPS29P27-201ENST00000463711 170 ntBASIC0□□□□□ -2.41
CACNA1AO00555 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0□□□□□ -2.41
CACNA1AO00555 MTCO3P7-201ENST00000510008 774 ntBASIC0□□□□□ -2.41
CACNA1AO00555 SNORD79.1-201ENST00000516069 84 ntBASIC0□□□□□ -2.41
CACNA1AO00555 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0□□□□□ -2.41
CACNA1AO00555 AC023824.3-201ENST00000569003 562 ntBASIC0□□□□□ -2.41
CACNA1AO00555 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0□□□□□ -2.41
CACNA1AO00555 AC107304.1-201ENST00000604229 296 ntBASIC0□□□□□ -2.41
CACNA1AO00555 RNU6-862P-201ENST00000362804 105 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-223P-201ENST00000362830 107 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-252P-201ENST00000363232 107 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-673P-201ENST00000365084 104 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 SNORA29-201ENST00000384183 140 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC092809.3-201ENST00000415453 231 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 MTCO2P5-201ENST00000422621 426 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC093422.3-201ENST00000428506 305 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RPL31P54-201ENST00000429803 370 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms