Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC122133.1-201ENST00000613964 233 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC079248.2-201ENST00000623779 326 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC022418.1-201ENST00000624118 445 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK1AO00322 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK1AO00322 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK1AO00322 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPK1AO00322 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 RNU6-552P-201ENST00000362869 119 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 RNU6-271P-201ENST00000363858 105 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 Y_RNA.504-201ENST00000384481 104 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 SNORD70.1-201ENST00000391007 85 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 RNA5SP201-201ENST00000410316 124 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1AO00322 MTND3P17-201ENST00000416968 344 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1AO00322 AC245517.4-201ENST00000448601 281 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 ATP5J2P3-201ENST00000451550 258 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC013470.1-201ENST00000453438 462 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK1AO00322 AC022364.2-201ENST00000457963 554 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1AO00322 AC093852.1-201ENST00000503587 266 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1AO00322 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.07□□□□□ -2.24
UPK1AO00322 MTCO3P28-201ENST00000513351 515 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 RNA5SP445-201ENST00000515889 115 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC008015.1-201ENST00000555505 465 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AP005136.1-201ENST00000579765 429 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC245014.2-201ENST00000603689 287 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC246785.4-201ENST00000605374 287 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AL121890.5-201ENST00000620848 304 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AL603839.4-201ENST00000624658 1005 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AL159152.1-201ENST00000635019 2587 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK1AO00322 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UPK1AO00322 AC100821.1-201ENST00000523153 2479 ntBASIC1.07□□□□□ -2.24
UPK1AO00322 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.06□□□□□ -2.24
UPK1AO00322 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UPK1AO00322 SNORD32A-201ENST00000364805 84 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 SNORD31B-201ENST00000364977 69 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 RNU4-48P-201ENST00000365559 182 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 RNU6-456P-201ENST00000384493 107 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 RNU6-296P-201ENST00000384608 107 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 RPS29P13-201ENST00000402041 169 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK1AO00322 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
UPK1AO00322 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AL133396.1-201ENST00000432048 687 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 SNAP23P1-201ENST00000433229 246 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 HSPE1P9-201ENST00000440046 311 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC007395.1-201ENST00000451333 677 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 TOMM22P6-201ENST00000465035 409 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.06□□□□□ -2.24
UPK1AO00322 RNU6-1098P-201ENST00000516772 96 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC069113.1-201ENST00000517763 267 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 EIF4A1P12-201ENST00000551910 141 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC103996.1-201ENST00000555468 102 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC021231.3-201ENST00000558497 370 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 CYP4A27P-201ENST00000567218 190 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC090517.1-201ENST00000569307 266 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 MIR4703-201ENST00000577728 79 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC078795.3-201ENST00000602913 472 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AC002044.1-201ENST00000606707 158 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 AL136370.1-201ENST00000608166 691 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
UPK1AO00322 PCGEM1.1-201ENST00000613431 131 ntBASIC1.06□□□□□ -2.24
UPK1AO00322 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
UPK1AO00322 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UPK1AO00322 AL391987.6-201ENST00000305671 199 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 Y_RNA.132-201ENST00000363421 102 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RNU6-553P-201ENST00000364047 96 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RNU6-827P-201ENST00000365553 106 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 MIR513A1-201ENST00000385138 129 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 MIR208B-201ENST00000401172 77 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AL117339.3-201ENST00000418733 162 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK1AO00322 MTCO2P6-201ENST00000463134 685 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RPS26P55-201ENST00000471178 356 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RPL26P26-201ENST00000480251 434 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1AO00322 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1AO00322 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK1AO00322 MTND1P22-201ENST00000510572 951 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1AO00322 RNU2-69P-201ENST00000516061 100 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RNA5SP458-201ENST00000516188 119 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RNU6-759P-201ENST00000516740 103 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 SNORA18.6-201ENST00000516792 115 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UPK1AO00322 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1AO00322 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1AO00322 SNORA77B-201ENST00000578179 125 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms