Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.63□□□□□ -1.67
RCCD1A6NED2 AC112771.1-201ENST00000463581 102 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 RNA5SP20-201ENST00000515976 84 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 SNORD77.4-201ENST00000516158 81 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 SNORA18.4-201ENST00000516440 124 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 RNA5SP360-201ENST00000516555 118 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 RNU6-1098P-201ENST00000516772 96 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 AC091042.1-201ENST00000579213 173 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 MIR2681-201ENST00000581814 105 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 AL022345.2-201ENST00000606307 135 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 MIR6820-201ENST00000611508 62 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RCCD1A6NED2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RCCD1A6NED2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RCCD1A6NED2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RCCD1A6NED2 MAPK10-320ENST00000641462 6696 ntBASIC4.63□□□□□ -1.67
RCCD1A6NED2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
RCCD1A6NED2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 AC000123.3-201ENST00000624029 4975 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 RNA5SP388-201ENST00000362584 119 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 Y_RNA.91-201ENST00000363042 107 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 RNU6-508P-201ENST00000363231 103 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 RNA5SP87-201ENST00000384155 118 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 SNORA72-201ENST00000384339 132 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 RNA5SP397-201ENST00000391323 118 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 MIR1283-1-201ENST00000408494 87 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 MTATP6P21-201ENST00000440681 189 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 RNU1-61P-201ENST00000516107 151 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 AC018630.3-201ENST00000542637 96 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 AC022655.2-201ENST00000577280 318 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 AC105245.1-201ENST00000581934 244 ntBASIC4.62□□□□□ -1.67
RCCD1A6NED2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.62□□□□□ -1.67
RCCD1A6NED2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RCCD1A6NED2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RCCD1A6NED2 SNORD32B-201ENST00000364460 84 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 Y_RNA.281-201ENST00000364774 94 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 RNA5SP306-201ENST00000411087 107 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 AP002884.2-201ENST00000471647 395 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 PARP4P3-201ENST00000510265 317 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 RNU6-63P-201ENST00000516690 95 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RCCD1A6NED2 MIR4753-201ENST00000585119 83 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 AL020997.2-201ENST00000602607 184 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 AC079587.1-201ENST00000603846 277 ntBASIC4.61□□□□□ -1.67
RCCD1A6NED2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.61□□□□□ -1.67
RCCD1A6NED2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RCCD1A6NED2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RCCD1A6NED2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RCCD1A6NED2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RCCD1A6NED2 Y_RNA.52-201ENST00000362760 96 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 MIR181A2-201ENST00000384863 110 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 RNU6-750P-201ENST00000390946 107 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 RNU6-554P-201ENST00000410466 106 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 AC004552.1-201ENST00000419089 348 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.6□□□□□ -1.67
RCCD1A6NED2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.6□□□□□ -1.67
RCCD1A6NED2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.6□□□□□ -1.67
RCCD1A6NED2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.6□□□□□ -1.67
RCCD1A6NED2 RNU7-23P-201ENST00000459465 62 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 RPS26P3-201ENST00000470205 348 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 RPS29P22-201ENST00000472363 168 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 AC090543.2-201ENST00000483963 348 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 AC004057.1-201ENST00000485827 348 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 RNU6-126P-201ENST00000516685 103 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 RNU1-104P-201ENST00000517280 175 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.6□□□□□ -1.67
RCCD1A6NED2 MIR6076-201ENST00000617521 113 ntBASIC4.6□□□□□ -1.67
RCCD1A6NED2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RCCD1A6NED2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RCCD1A6NED2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RCCD1A6NED2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RCCD1A6NED2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RCCD1A6NED2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RCCD1A6NED2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.59□□□□□ -1.67
RCCD1A6NED2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RCCD1A6NED2 SNORA70F-201ENST00000384142 135 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms