Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 U8.2-201ENST00000363156 134 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 Y_RNA.279-201ENST00000364763 95 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 RNU6-1283P-201ENST00000365314 105 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 RNU6-790P-201ENST00000384479 105 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 Y_RNA.504-201ENST00000384481 104 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 MIR521-1-201ENST00000384902 87 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 RPL21P111-201ENST00000418453 477 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AL590556.1-201ENST00000423231 483 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 GPM6BP3-201ENST00000442797 145 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AL353752.1-201ENST00000454946 260 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 PPP1R2P5-201ENST00000457256 603 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 SNORA48.11-201ENST00000517015 89 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 MIR4742-201ENST00000581069 85 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 MIR4801-201ENST00000582704 82 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AC078795.3-201ENST00000602913 472 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AL034555.1-201ENST00000604816 211 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 DUXAP9-208ENST00000622815 614 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.97□□□□□ -2.09
TRBV5-4A0A0C4DH59 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 snoU2_19.1-201ENST00000362361 80 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 Y_RNA.151-201ENST00000363566 112 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-1032P-201ENST00000384100 107 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-301P-201ENST00000384277 107 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR561-201ENST00000385216 97 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 SNORA26.3-201ENST00000391119 136 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL353572.1-201ENST00000442490 417 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 TRBV12-1-201ENST00000479785 344 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC091874.1-201ENST00000511402 339 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 CBX3P7-201ENST00000532876 502 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC016256.1-201ENST00000547971 354 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC021231.3-201ENST00000558497 370 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC019193.3-201ENST00000609144 554 ntBASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.96□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-845P-201ENST00000362578 103 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR517A-201ENST00000385001 87 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 HMGB3P2-201ENST00000411913 584 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC138393.2-201ENST00000414742 246 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 DAP3P1-201ENST00000441522 278 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC116353.2-201ENST00000505332 712 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 PTP4A1P4-201ENST00000512479 322 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-567P-201ENST00000516746 107 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AP005639.2-201ENST00000527592 928 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR4790-201ENST00000577799 79 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR3923-201ENST00000579521 83 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AP001094.1-201ENST00000579805 193 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR4658-201ENST00000584344 65 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC124303.1-201ENST00000605703 360 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL161423.1-201ENST00000613700 262 ntBASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRBV5-4A0A0C4DH59 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 Y_RNA.123-201ENST00000363338 102 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-1274P-201ENST00000384557 107 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 HMGN2P35-201ENST00000412164 270 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 MTND1P17-201ENST00000448961 204 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 MTND3P10-201ENST00000450967 341 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms