Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC073476.4-201ENST00000628409 72 ntBASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 RLIMP1-201ENST00000339626 1680 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 RNA5SP361-201ENST00000362686 118 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AL590762.4-201ENST00000425885 253 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC104389.3-201ENST00000445629 235 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 RBMY2UP-201ENST00000453474 324 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC011276.1-201ENST00000469688 323 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC010469.2-201ENST00000496412 480 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 SNORA31.26-201ENST00000517250 137 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AC131281.1-201ENST00000522984 164 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 RN7SL703P-201ENST00000578485 302 ntBASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GTF3C3Q9Y5Q9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 Y_RNA.276-201ENST00000364732 109 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 U8.12-201ENST00000384701 133 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 AC245028.1-201ENST00000423259 256 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 AL691449.1-201ENST00000426570 421 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 UQCRBP2-201ENST00000447827 297 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU7-14P-201ENST00000459331 62 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 VTRNA2-2P-201ENST00000516091 103 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-1098P-201ENST00000516772 96 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 SNORA40.15-201ENST00000516884 107 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 MZT1P2-201ENST00000604387 248 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 PRR13P7-201ENST00000605538 430 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 AC019176.2-201ENST00000611579 315 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 AP000553.6-201ENST00000641242 118 ntBASIC4.6□□□□□ -1.67
GTF3C3Q9Y5Q9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 RNA5SP125-201ENST00000364843 120 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-611P-201ENST00000384276 104 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 AL357139.1-201ENST00000407792 426 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 IFNA11P-201ENST00000446352 526 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 AC091179.3-201ENST00000474761 144 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 AC067942.3-201ENST00000512025 362 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 AL117187.1-201ENST00000555482 181 ntBASIC4.59□□□□□ -1.67
GTF3C3Q9Y5Q9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.59□□□□□ -1.68
GTF3C3Q9Y5Q9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 Y_RNA.153-201ENST00000363615 91 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 Y_RNA.498-201ENST00000384460 102 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 MIR550A3-201ENST00000390735 95 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 RPEP5-201ENST00000441137 268 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 AC074290.1-201ENST00000448883 135 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 AC010618.1-201ENST00000469924 477 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 RN7SL594P-201ENST00000470590 287 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 RNA5SP217-201ENST00000515959 91 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 AC233702.2-202ENST00000562547 291 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 AC068205.3-201ENST00000636385 468 ntBASIC4.58□□□□□ -1.68
GTF3C3Q9Y5Q9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 Y_RNA.176-201ENST00000363815 109 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 Y_RNA.183-201ENST00000363882 113 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-926P-201ENST00000384075 107 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 MIR129-1-201ENST00000384972 72 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AL356057.3-201ENST00000402607 340 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AL357075.1-201ENST00000404107 726 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 CYCSP19-201ENST00000411715 316 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 MRPS35P2-201ENST00000508242 191 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AC104619.4-201ENST00000510773 249 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 RN7SL600P-201ENST00000581811 299 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 FAM25E-202ENST00000608562 189 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF3C3Q9Y5Q9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-438P-201ENST00000365561 103 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-1310P-201ENST00000384153 107 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 SNORA46-201ENST00000384762 135 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AL358176.2-201ENST00000425769 204 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms