Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 RPS12P10-201ENST00000427031 377 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 AP002884.2-201ENST00000471647 395 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 AC109327.1-201ENST00000471666 403 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 RNU7-116P-201ENST00000516940 62 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 MIR3121-201ENST00000579680 77 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 MIR6716-201ENST00000613413 80 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 MIR6076-201ENST00000617521 113 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 AP005019.3-201ENST00000620418 560 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC016588.2-201ENST00000632484 3021 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 RNU6-271P-201ENST00000363858 105 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 RNA5SP496-201ENST00000391240 109 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 MIR873-201ENST00000401120 77 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 Z98745.1-201ENST00000402553 494 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 MIR1193-201ENST00000408109 78 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 RPS29P17-201ENST00000430795 166 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 HMGN2P20-201ENST00000437531 273 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 RBMY2UP-201ENST00000453474 324 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 RPL30P14-201ENST00000482744 348 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 RNU6-589P-201ENST00000516485 107 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC093331.1-201ENST00000521474 169 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 CYCSP29-201ENST00000533731 318 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC133485.4-201ENST00000561835 220 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC138907.4-201ENST00000570107 226 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 POLR3GP1-201ENST00000594073 261 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC006254.2-201ENST00000603259 279 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC012640.5-201ENST00000623897 319 ntBASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
HRH3Q9Y5N1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 Y_RNA.309-201ENST00000365046 111 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 SNORD18B-201ENST00000365659 72 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 RNU1-57P-201ENST00000384491 166 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AC023141.4-201ENST00000412031 328 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AL158823.1-201ENST00000418441 478 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AC146944.2-203ENST00000502493 354 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AC139495.1-202ENST00000513164 354 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 RNU6-772P-201ENST00000516042 105 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AC120024.3-201ENST00000603167 156 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AP003357.1-201ENST00000604497 148 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 AC010889.1-201ENST00000566193 2666 ntBASIC4.09□□□□□ -1.75
HRH3Q9Y5N1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.09□□□□□ -1.76
HRH3Q9Y5N1 AL159152.1-201ENST00000635019 2587 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RNU6-1082P-201ENST00000364574 107 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RNU1-63P-201ENST00000383902 164 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RNU6-1323P-201ENST00000384025 107 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 MIR1185-2-201ENST00000408687 86 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RNU2-49P-201ENST00000410666 184 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 AL445584.1-201ENST00000431451 330 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 AL358232.1-201ENST00000448030 501 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RPL23AP7-203ENST00000449021 469 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 CENPBD1P1-201ENST00000464061 469 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RPL23AP54-201ENST00000495129 419 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 RNU6-1337P-201ENST00000516525 95 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 AC125257.1-201ENST00000560400 2930 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 AL137843.1-201ENST00000605078 385 ntBASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HRH3Q9Y5N1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.07□□□□□ -1.76
HRH3Q9Y5N1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms