Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC090877.1-201ENST00000561418 344 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 TUG1_4.1-201ENST00000619464 181 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AC018555.1-201ENST00000567548 1980 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.15□□□□□ -1.74
PCDHGA11Q9Y5H2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGA11Q9Y5H2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGA11Q9Y5H2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP505-201ENST00000364748 108 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.572-201ENST00000384757 98 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORA48.5-201ENST00000391143 135 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP38-201ENST00000410750 119 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 HSPE1P21-201ENST00000438283 308 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 PHBP16-201ENST00000446318 950 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR2114-201ENST00000516645 80 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AC008739.2-201ENST00000597006 317 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AC020914.4-201ENST00000597690 277 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AC140479.6-201ENST00000633535 357 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA11Q9Y5H2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU6-728P-201ENST00000365375 104 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.353-201ENST00000365440 108 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP332-201ENST00000391063 115 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 YME1L1P1-201ENST00000429435 297 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AL445584.1-201ENST00000431451 330 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RBMY2UP-201ENST00000453474 324 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU6-1211P-201ENST00000459179 105 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RN7SL98P-201ENST00000462271 300 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RPS29P22-201ENST00000472363 168 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU6-1333P-201ENST00000516162 93 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORA31.21-201ENST00000517180 77 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AC007448.1-201ENST00000582714 234 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR3658-201ENST00000636291 56 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AC068700.1-201ENST00000565862 3754 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 AL513302.2-201ENST00000562313 1842 ntBASIC4.14□□□□□ -1.75
PCDHGA11Q9Y5H2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 MFSD8-216ENST00000641147 4009 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP388-201ENST00000362584 119 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.71-201ENST00000362892 104 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.172-201ENST00000363765 102 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.261-201ENST00000364631 102 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU6-643P-201ENST00000384018 107 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR15B-201ENST00000385045 98 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR1185-2-201ENST00000408687 86 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 RPS4XP2-201ENST00000458402 793 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU5F-4P-201ENST00000516581 114 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 AC022655.2-201ENST00000577280 318 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR3646-201ENST00000578301 84 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR7703-201ENST00000620784 77 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 AL354798.1-201ENST00000622505 329 ntBASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA11Q9Y5H2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 AL136164.4-201ENST00000625013 2135 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.229-201ENST00000364347 113 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORD116-14-201ENST00000383894 92 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORD116-17-201ENST00000383929 92 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORD116-15-201ENST00000384445 92 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORD20-201ENST00000384550 80 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORD116-19-201ENST00000384729 92 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR29B2-201ENST00000385055 81 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORA12-201ENST00000391162 147 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 AL606845.1-201ENST00000404881 255 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR1179-201ENST00000408703 91 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 AC097463.2-201ENST00000421074 142 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms