Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RPS26P28-201ENST00000470806 348 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 RPS29P2-201ENST00000479278 136 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 RN7SKP179-201ENST00000516126 217 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AP003730.1-201ENST00000524605 285 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 RPL23AP97-201ENST00000568955 471 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 MIR92B-201ENST00000607575 96 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 MIR7154-201ENST00000620673 73 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AC007546.2-201ENST00000623996 360 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AC069528.2-201ENST00000624849 1991 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AC026241.1-201ENST00000517873 2142 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 MIR383-201ENST00000362257 73 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 RNU6-1180P-201ENST00000364935 107 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 Y_RNA.521-201ENST00000384560 114 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 RNU4-43P-201ENST00000410628 137 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 AL445584.1-201ENST00000431451 330 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 RPL30P14-201ENST00000482744 348 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 AC079587.1-201ENST00000603846 277 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 AL138721.1-201ENST00000616756 179 ntBASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB11Q9Y5F2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AC000403.1-201ENST00000613696 3585 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AC087190.4-201ENST00000574616 8334 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AL133243.3-201ENST00000617415 3004 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 SNORD114-7-201ENST00000362520 77 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 Y_RNA.251-201ENST00000364551 99 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 RNY3P5-201ENST00000384127 102 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 RNU7-23P-201ENST00000459465 62 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AP002884.2-201ENST00000471647 395 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 RNU2-56P-201ENST00000516826 190 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 IGLV3-26-201ENST00000520756 302 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AC113403.1-201ENST00000604910 193 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 RPL17P51-201ENST00000605218 238 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 MIR548AY-201ENST00000617669 107 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AL773545.4-201ENST00000637262 310 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AL513478.4-201ENST00000641636 310 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 AL513302.2-201ENST00000562313 1842 ntBASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB11Q9Y5F2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 SPRR2C-201ENST00000290702 219 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 U8.7-201ENST00000364940 136 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 MIR134-201ENST00000385258 73 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 MIR708-201ENST00000390708 88 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 SNORA11F-201ENST00000408237 128 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 RNU6-588P-201ENST00000410281 105 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 HSPE1P21-201ENST00000438283 308 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 HSPE1P13-201ENST00000451143 297 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 RPS4XP2-201ENST00000458402 793 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 RPL23AP62-201ENST00000463396 453 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 RNU7-115P-201ENST00000516433 55 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 HSPE1P18-201ENST00000517602 280 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AL160290.3-201ENST00000604869 165 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AC002076.2-201ENST00000617362 122 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 AC140479.6-201ENST00000633535 357 ntBASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHB11Q9Y5F2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB11Q9Y5F2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHB11Q9Y5F2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PCDHB11Q9Y5F2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PCDHB11Q9Y5F2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB11Q9Y5F2 MIR331-201ENST00000362302 94 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms