Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 MIR3923-201ENST00000579521 83 ntBASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 HSPE1P7-201ENST00000604681 321 ntBASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 MIR378J-201ENST00000611988 109 ntBASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 AP000346.3-201ENST00000622821 210 ntBASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.8□□□□□ -1.8
HIF3AQ9Y2N7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 RNU6-768P-201ENST00000384683 107 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 MIR616-201ENST00000385293 97 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 RNU6-588P-201ENST00000410281 105 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 snoU13.28-201ENST00000459235 104 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 AC010469.1-201ENST00000463864 576 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 AC025554.1-201ENST00000505641 188 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 SNORD19.2-201ENST00000516978 73 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 TRAV8-5-201ENST00000537369 341 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 MTND5P34-201ENST00000568888 325 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 MIR4697-201ENST00000582977 78 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 MIR4715-201ENST00000584117 79 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 MIR6810-201ENST00000622701 70 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 MIR6844-201ENST00000637122 62 ntBASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
HIF3AQ9Y2N7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 SNORD74.4-201ENST00000364129 80 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 RNU6-748P-201ENST00000384648 107 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 RNU6-19P-201ENST00000384718 107 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 CBX3P9-201ENST00000402326 552 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 RPS29P17-201ENST00000430795 166 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 AL353748.1-201ENST00000440753 474 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 AC127455.1-201ENST00000565496 145 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 RNU6-91P-201ENST00000607774 107 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 AL391261.4-201ENST00000616012 481 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 MIR6076-201ENST00000617521 113 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 AL136164.4-201ENST00000625013 2135 ntBASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIF3AQ9Y2N7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 Y_RNA.294-201ENST00000364916 102 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 Y_RNA.521-201ENST00000384560 114 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AL133475.1-201ENST00000404414 305 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AL606845.1-201ENST00000404881 255 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AC004866.1-201ENST00000411748 78 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AC023141.4-201ENST00000412031 328 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 RNA5SP49-201ENST00000516450 115 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 RNA5SP519-201ENST00000516480 119 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AC091152.3-201ENST00000604227 325 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AL034555.1-201ENST00000604816 211 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 AL354798.1-201ENST00000622505 329 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 MIR7641-1-201ENST00000627518 61 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 MTND5P32-201ENST00000560711 1802 ntBASIC3.77□□□□□ -1.81
HIF3AQ9Y2N7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-915P-201ENST00000364943 103 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 SNORA37-201ENST00000384504 129 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 Y_RNA.563-201ENST00000384707 108 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 AL355497.1-201ENST00000406262 551 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 RPL23AP46-201ENST00000438548 490 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 RNU7-141P-201ENST00000459304 62 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 RPL32P34-201ENST00000486380 400 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 MIR3613-201ENST00000579844 87 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms