Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 Pinc.1-201ENST00000616452 154 ntBASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 AC002064.3-201ENST00000623448 346 ntBASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM35Q9UPQ4 MAPK10-286ENST00000641208 8747 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 RNU6-1292P-201ENST00000383856 107 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 AL451046.2-201ENST00000403074 277 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 AL355796.1-201ENST00000406706 323 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 RNA5SP57-201ENST00000459463 123 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 RPS26P55-201ENST00000471178 356 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 AC105137.1-201ENST00000484355 562 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 RNU2-44P-201ENST00000516795 194 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 SNORA31.20-201ENST00000517111 133 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 IGLV3-26-201ENST00000520756 302 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 RPL23AP91-201ENST00000569211 455 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 MIR2681-201ENST00000581814 105 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 AC012468.1-201ENST00000604888 430 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM35Q9UPQ4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM35Q9UPQ4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM35Q9UPQ4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.59□□□□□ -1.52
TRIM35Q9UPQ4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM35Q9UPQ4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM35Q9UPQ4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 RNA5SP372-201ENST00000390836 115 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 AL645939.1-201ENST00000453429 797 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 SNORA70.16-201ENST00000516390 95 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 RNY4P20-201ENST00000516678 93 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 RNU6-1149P-201ENST00000516810 97 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 AC100770.1-201ENST00000532310 322 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 MIR6716-201ENST00000613413 80 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM35Q9UPQ4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 PCAT14-202ENST00000627127 3935 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 RNU6-1138P-201ENST00000365359 106 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 SNORA1-201ENST00000384107 130 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 AL591419.1-201ENST00000427423 339 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 SNORD11-201ENST00000459124 84 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 AL592156.1-201ENST00000508758 304 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 RNU7-61P-201ENST00000515897 61 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 RN7SKP289-201ENST00000517244 295 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 AL138721.1-201ENST00000616756 179 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 AL162726.3-218ENST00000636401 95 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 MAPK10-303ENST00000641324 3959 ntBASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM35Q9UPQ4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 AL356292.1-201ENST00000283110 373 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 RNU6-271P-201ENST00000363858 105 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 RNU6-629P-201ENST00000384061 103 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 MIR325-201ENST00000385260 98 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 RPL39P25-201ENST00000449384 154 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 AC108145.1-201ENST00000503770 153 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 AC097462.1-201ENST00000514125 324 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 RNU6-240P-201ENST00000516098 97 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 RN7SL176P-201ENST00000580352 264 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 U7.3-201ENST00000616123 62 ntBASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM35Q9UPQ4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms