Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
NPC1L1Q9UHC9 AP003392.2-201ENST00000527269 208 ntBASIC2.04□□□□□ -2.08
NPC1L1Q9UHC9 CYCSP27-201ENST00000527643 293 ntBASIC2.04□□□□□ -2.08
NPC1L1Q9UHC9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.04□□□□□ -2.08
NPC1L1Q9UHC9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPC1L1Q9UHC9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.04□□□□□ -2.08
NPC1L1Q9UHC9 RNU6-266P-201ENST00000364225 107 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 Y_RNA.224-201ENST00000364308 111 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 AC073415.1-201ENST00000449240 153 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 MTCO2P18-201ENST00000457151 658 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 SNORA25.17-201ENST00000517184 124 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 AC087683.1-201ENST00000591187 441 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 ELOCP5-201ENST00000604924 333 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 AL356157.2-201ENST00000605122 111 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 AC017083.3-201ENST00000609955 700 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 uc_338.34-201ENST00000617467 174 ntBASIC2.03□□□□□ -2.08
NPC1L1Q9UHC9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-1322P-201ENST00000364309 107 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-1032P-201ENST00000384100 107 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 MTCYBP8-201ENST00000422855 651 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 VN1R108P-201ENST00000431580 830 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 snoU13.18-201ENST00000459483 104 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 AC034114.1-201ENST00000520293 285 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 AC107953.1-201ENST00000522216 297 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 AC022880.1-201ENST00000534017 973 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPC1L1Q9UHC9 Y_RNA.51-201ENST00000362725 102 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-546P-201ENST00000383991 107 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 Y_RNA.466-201ENST00000384294 113 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 SNORD37.1-201ENST00000390968 65 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-1158P-201ENST00000391167 107 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-293P-201ENST00000411259 106 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 MTND1P29-201ENST00000448112 647 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AC013470.1-201ENST00000453438 462 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 RNU7-180P-201ENST00000459240 63 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-261P-201ENST00000459506 102 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 SNORA31.24-201ENST00000517232 57 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AP000763.2-201ENST00000540641 163 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 SNORD53B-201ENST00000577887 78 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AC002044.1-201ENST00000606707 158 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 AC139792.3-201ENST00000623525 224 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
NPC1L1Q9UHC9 RNU1-23P-201ENST00000363361 144 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 RNU1-42P-201ENST00000364033 160 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-259P-201ENST00000383999 107 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AL591034.2-201ENST00000402839 359 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 RPS20P15-201ENST00000412792 311 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2□□□□□ -2.09
NPC1L1Q9UHC9 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 TIMM9P3-201ENST00000428659 274 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2□□□□□ -2.09
NPC1L1Q9UHC9 MTND2P22-201ENST00000444325 1033 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 MTATP6P26-201ENST00000445926 662 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC245102.2-201ENST00000448956 180 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC009474.2-201ENST00000451383 136 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 TPT1P7-201ENST00000458300 517 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2□□□□□ -2.09
NPC1L1Q9UHC9 SNORA40.12-201ENST00000516329 111 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC018630.3-201ENST00000542637 96 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC024909.2-201ENST00000553035 286 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC008749.1-201ENST00000597650 306 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AP001330.5-201ENST00000607176 411 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AC022202.1-201ENST00000613515 211 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
NPC1L1Q9UHC9 AP000560.1-201ENST00000624150 1937 ntBASIC2□□□□□ -2.09
NPC1L1Q9UHC9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-1141P-201ENST00000364520 107 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 U3.13-201ENST00000364804 214 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-611P-201ENST00000384276 104 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 RNU6-1274P-201ENST00000384557 107 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 AC068050.1-201ENST00000394891 380 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 RPS29P13-201ENST00000402041 169 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 RNU2-32P-201ENST00000411193 191 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 CBX3P6-201ENST00000430257 527 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 AL606489.2-201ENST00000433886 234 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 AC243964.1-201ENST00000441814 261 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 AL031274.1-201ENST00000450334 232 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 AL137159.1-201ENST00000452808 512 ntBASIC1.99□□□□□ -2.09
NPC1L1Q9UHC9 AL122001.1-201ENST00000457027 370 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms