Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 NCOR1P3-201ENST00000420479 303 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC112492.4-201ENST00000456549 352 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 RPS29P15-201ENST00000458329 171 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 RNU1-131P-201ENST00000458943 161 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC005741.1-201ENST00000511094 432 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 LRRC34P2-201ENST00000514850 553 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 SUB1P4-201ENST00000566062 339 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 MIR4528-201ENST00000577763 90 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC119751.7-201ENST00000600494 245 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 VN1R107P-201ENST00000601784 209 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC245014.2-201ENST00000603689 287 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AP001485.1-201ENST00000604799 199 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC246785.4-201ENST00000605374 287 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC123912.5-201ENST00000605470 343 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC136475.10-201ENST00000620253 385 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 Z69908.1-201ENST00000622603 247 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC022418.1-201ENST00000624118 445 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 AC097520.1-201ENST00000624435 385 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 MIR3974-201ENST00000637126 96 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 RNU6-428P-201ENST00000362942 107 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 U8.10-201ENST00000384260 133 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 RNU6-456P-201ENST00000384493 107 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 RPS29P13-201ENST00000402041 169 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 MTCYBP2-201ENST00000407745 171 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC090960.1-201ENST00000421072 306 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 MTCO2P34-201ENST00000421994 607 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC010975.2-201ENST00000427781 588 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC133104.1-201ENST00000429100 218 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC244670.1-201ENST00000436879 112 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 MTND4P32-201ENST00000437189 1237 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 MTND1P27-201ENST00000451117 902 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC010409.1-201ENST00000487382 476 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC110760.3-201ENST00000598794 467 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 AC022513.1-201ENST00000624512 117 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 WWP1P1-201ENST00000466609 2769 ntBASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KLHL28Q9NXS3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 RNU4-48P-201ENST00000365559 182 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 RNU6-393P-201ENST00000384475 107 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 RNU4-62P-201ENST00000410125 130 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 RN7SKP61-201ENST00000410642 295 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 BTF3P4-201ENST00000418852 495 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC123900.1-201ENST00000420390 96 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 PIGFP2-201ENST00000421400 651 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AL590135.1-201ENST00000422215 156 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AL358453.1-201ENST00000422522 250 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC019205.3-201ENST00000424573 156 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 MTCO2P11-201ENST00000431069 680 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 MTCO1P19-201ENST00000443487 500 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC016700.2-201ENST00000446011 156 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 C1DP4-201ENST00000455429 424 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC130509.1-201ENST00000464158 433 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 SNRPGP7-201ENST00000469016 106 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC015911.1-201ENST00000495111 156 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC010486.3-201ENST00000511602 785 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 SNORA31.16-201ENST00000516773 139 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 RNU6-430P-201ENST00000517078 107 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 MIR4498-201ENST00000577599 66 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 MIR4703-201ENST00000577728 79 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 MIR4303-201ENST00000581299 66 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC091805.2-201ENST00000603848 235 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC025449.1-201ENST00000603896 529 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AL356157.2-201ENST00000605122 111 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC087752.4-201ENST00000605911 462 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC068944.2-201ENST00000610373 403 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC008147.4-201ENST00000617570 1204 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 ELL2P3-201ENST00000457883 1602 ntBASIC1.48□□□□□ -2.17
KLHL28Q9NXS3 AC006026.1-201ENST00000444025 1803 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 SNORD32A-201ENST00000364805 84 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 RNU6-434P-201ENST00000384376 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms