Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 RNU6-1278P-201ENST00000516130 107 ntBASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 RNU6-58P-201ENST00000517143 103 ntBASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 AL451007.1-201ENST00000595491 289 ntBASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 AC024220.1-201ENST00000603675 484 ntBASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 AC006001.4-201ENST00000622243 395 ntBASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH18Q9HCL0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RNU6-662P-201ENST00000384253 104 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 MIR329-1-201ENST00000385028 80 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RPS29P4-201ENST00000414733 161 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC007969.2-201ENST00000441891 191 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RPL37P4-201ENST00000448908 268 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 MTATP6P7-201ENST00000453315 681 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC006026.2-201ENST00000457376 180 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RPL21P104-201ENST00000464143 478 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RPL30P5-201ENST00000494923 336 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RPS27AP10-201ENST00000496103 208 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 RNU6-966P-201ENST00000516479 104 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AL391261.3-201ENST00000557194 520 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC055872.1-201ENST00000570978 278 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC037487.3-201ENST00000606668 112 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 AC104465.1-201ENST00000611365 139 ntBASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDH18Q9HCL0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC093908.1-201ENST00000623125 8092 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU6-50P-201ENST00000362356 103 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU6-1020P-201ENST00000363684 107 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU6-326P-201ENST00000365480 107 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU6-142P-201ENST00000384019 107 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 Y_RNA.464-201ENST00000384282 110 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU5A-5P-201ENST00000411054 116 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNU2-61P-201ENST00000411069 191 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AL392103.1-201ENST00000447000 198 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AP000705.1-201ENST00000454567 350 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC117440.1-201ENST00000474107 571 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC091959.1-201ENST00000495857 238 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 FCF1P8-201ENST00000510322 597 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RN7SKP49-201ENST00000516675 260 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 RNA5SP468-201ENST00000516782 93 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 Y_RNA.703-201ENST00000516846 111 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC012468.1-201ENST00000604888 430 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AC005828.6-201ENST00000606610 232 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 AL359198.2-201ENST00000611836 194 ntBASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PCDH18Q9HCL0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 RNU6-873P-201ENST00000363833 107 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 RNU6-514P-201ENST00000384208 107 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 RNU6-1289P-201ENST00000384431 106 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 RNU6-159P-201ENST00000391080 106 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 PTMAP2-201ENST00000397627 327 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 RPL26P27-201ENST00000414397 437 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 HMGN2P31-201ENST00000432430 273 ntBASIC3.48□□□□□ -1.85
PCDH18Q9HCL0 AL353705.1-201ENST00000433468 480 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms