Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 RNA5SP197-201ENST00000363357 119 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 RNU4-56P-201ENST00000364700 142 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.418-201ENST00000384029 102 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 SNORA19-201ENST00000384737 128 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 EI24P2-201ENST00000397776 1076 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 RNU2-37P-201ENST00000410695 177 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 RPL23AP82-202ENST00000427528 469 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AC007395.1-201ENST00000451333 677 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 snoU13.28-201ENST00000459235 104 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AC109925.1-201ENST00000478069 331 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AC090525.1-201ENST00000479116 478 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 RPL7P47-201ENST00000497299 556 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AC074133.1-201ENST00000515696 183 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-255P-201ENST00000516957 105 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 MIR4325-201ENST00000583049 90 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 MIR3133-201ENST00000583157 78 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 HMGN2P15-201ENST00000585707 270 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AL078605.1-201ENST00000603529 500 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AL357075.2-201ENST00000614906 189 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AL590240.4-201ENST00000616908 390 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AC048347.1-201ENST00000624621 427 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 AC002543.1-201ENST00000299783 1954 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 ZNF204P-201ENST00000416749 2397 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 MTND5P35-201ENST00000557537 1720 ntBASIC4.18□□□□□ -1.74
ZFYVE28Q9HCC9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 SNORD6-201ENST00000365444 73 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-1289P-201ENST00000384431 106 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.498-201ENST00000384460 102 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.510-201ENST00000384511 114 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AL591034.1-201ENST00000407447 340 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 UQCRBP2-201ENST00000447827 297 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 MRPS10P1-201ENST00000448483 130 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AC005042.3-201ENST00000453230 174 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 HMGN2P16-201ENST00000456802 261 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AC007215.1-201ENST00000464893 276 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 RNA5SP208-201ENST00000516156 78 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.703-201ENST00000516846 111 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AC105137.2-201ENST00000569073 466 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 MIR3124-201ENST00000582636 67 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AC022441.3-201ENST00000605737 136 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 MIR6076-201ENST00000617521 113 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 AC093908.1-201ENST00000623125 8092 ntBASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZFYVE28Q9HCC9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AL109809.4-201ENST00000603520 2185 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-47P-201ENST00000383866 107 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 MIR320B2-201ENST00000408479 138 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 MIR1289-1-201ENST00000408836 144 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-625P-201ENST00000459412 107 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AC107626.1-201ENST00000471084 183 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 RPS26P15-201ENST00000488067 348 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 SNORA31.16-201ENST00000516773 139 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AC008011.1-201ENST00000545989 227 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 RPL21P9-201ENST00000556149 474 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 MIR3136-201ENST00000583498 78 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 HSPE1P7-201ENST00000604681 321 ntBASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZFYVE28Q9HCC9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZFYVE28Q9HCC9 BX322639.1-202ENST00000423987 2213 ntBASIC4.15□□□□□ -1.74
ZFYVE28Q9HCC9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.15□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-245P-201ENST00000384020 107 ntBASIC4.15□□□□□ -1.75
ZFYVE28Q9HCC9 RNU6-793P-201ENST00000384233 104 ntBASIC4.15□□□□□ -1.75
ZFYVE28Q9HCC9 SNORD17-201ENST00000390930 237 ntBASIC4.15□□□□□ -1.75
ZFYVE28Q9HCC9 HSPE1P26-201ENST00000405341 275 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms