Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 AL359955.1-201ENST00000455242 3275 ntBASIC7.84□□□□□ -1.15
SENP3Q9H4L4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 RNU6-160P-201ENST00000384591 107 ntBASIC7.84□□□□□ -1.15
SENP3Q9H4L4 MIR1193-201ENST00000408109 78 ntBASIC7.84□□□□□ -1.15
SENP3Q9H4L4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.84□□□□□ -1.15
SENP3Q9H4L4 RNU6-602P-201ENST00000411155 105 ntBASIC7.84□□□□□ -1.15
SENP3Q9H4L4 AC069503.3-201ENST00000618674 145 ntBASIC7.84□□□□□ -1.15
SENP3Q9H4L4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 SNORD8-201ENST00000363915 110 ntBASIC7.83□□□□□ -1.16
SENP3Q9H4L4 RNU6-424P-201ENST00000384367 105 ntBASIC7.83□□□□□ -1.16
SENP3Q9H4L4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 RAC1P2-201ENST00000511164 579 ntBASIC7.83□□□□□ -1.16
SENP3Q9H4L4 RNU7-53P-201ENST00000516705 60 ntBASIC7.83□□□□□ -1.16
SENP3Q9H4L4 MIR4433B-201ENST00000581329 102 ntBASIC7.83□□□□□ -1.16
SENP3Q9H4L4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SENP3Q9H4L4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-447P-201ENST00000410293 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-1118P-201ENST00000410382 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-1076P-201ENST00000410397 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-355P-201ENST00000410427 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-791P-201ENST00000410467 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-705P-201ENST00000410601 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-1100P-201ENST00000410691 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-860P-201ENST00000410860 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNA5SP104-201ENST00000410989 118 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-1217P-201ENST00000411276 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-785P-201ENST00000411324 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 Y_RNA.648-201ENST00000459455 110 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 RNU6-958P-201ENST00000516995 106 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 MIR4311-201ENST00000580794 100 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 AL133481.2-203ENST00000607558 139 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 MIR4791-201ENST00000607666 84 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 U6.90-201ENST00000614007 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 U6.70-201ENST00000620287 104 ntBASIC7.82□□□□□ -1.16
SENP3Q9H4L4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC7.82□□□□□ -1.16
SENP3Q9H4L4 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 RNU6-1079P-201ENST00000362861 110 ntBASIC7.81□□□□□ -1.16
SENP3Q9H4L4 SNORA70.2-201ENST00000364506 135 ntBASIC7.81□□□□□ -1.16
SENP3Q9H4L4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 RNU6-881P-201ENST00000516813 102 ntBASIC7.81□□□□□ -1.16
SENP3Q9H4L4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 AC006349.1-201ENST00000555526 235 ntBASIC7.81□□□□□ -1.16
SENP3Q9H4L4 MIR92B-201ENST00000607575 96 ntBASIC7.81□□□□□ -1.16
SENP3Q9H4L4 AC087385.3-201ENST00000620477 187 ntBASIC7.81□□□□□ -1.16
SENP3Q9H4L4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SENP3Q9H4L4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 AC022893.2-201ENST00000564832 3296 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 CD24P4-201ENST00000382840 243 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 SNORA70.7-201ENST00000384159 133 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 RNU6-154P-201ENST00000384306 106 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 ZFRP1-201ENST00000457579 2970 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 snoU13.28-201ENST00000459235 104 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 RNU1-142P-201ENST00000516682 145 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 SCARNA16.4-201ENST00000516956 187 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 U6.108-201ENST00000637764 58 ntBASIC7.8□□□□□ -1.16
SENP3Q9H4L4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SENP3Q9H4L4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SENP3Q9H4L4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SENP3Q9H4L4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SENP3Q9H4L4 AC097463.2-201ENST00000421074 142 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms