Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 RNU4-15P-201ENST00000362613 141 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 SNORD115-30-201ENST00000364117 82 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-381P-201ENST00000391259 108 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 MIR1251-201ENST00000408552 70 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 RNU2-37P-201ENST00000410695 177 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 AC004866.1-201ENST00000411748 78 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 TOMM22P2-201ENST00000430735 237 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 MIR1254-2-201ENST00000579553 63 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 uc_338.32-201ENST00000615087 172 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 AC013791.1-201ENST00000616619 62 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 MIR7151-201ENST00000617477 60 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 AC018555.1-201ENST00000567548 1980 ntBASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHE41Q9C0J9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-655P-201ENST00000362858 107 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-103P-201ENST00000363686 107 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-801P-201ENST00000364087 105 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-239P-201ENST00000390990 99 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 SNORA26.5-201ENST00000391215 123 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 EBAG9P1-201ENST00000418955 543 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AIMP1P2-201ENST00000425294 312 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AL365496.1-201ENST00000426885 215 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AC091179.1-201ENST00000461606 579 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RPL23AP70-201ENST00000483361 460 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU6-426P-201ENST00000516464 97 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 HSPE1P18-201ENST00000517602 280 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AC025627.2-201ENST00000576220 160 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 MIR3160-1-201ENST00000577972 85 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 MIR3939-201ENST00000582614 106 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 RNU1-30P-201ENST00000606575 163 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 AF127577.6-201ENST00000623352 2191 ntBASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.84□□□□□ -1.79
BHLHE41Q9C0J9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
BHLHE41Q9C0J9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
BHLHE41Q9C0J9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.8
BHLHE41Q9C0J9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
BHLHE41Q9C0J9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 U1.1-201ENST00000384101 164 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 SNORA8.3-201ENST00000384679 139 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 SNORA57.1-201ENST00000391227 145 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-855P-201ENST00000410395 104 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 RPS3P1-201ENST00000456781 192 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 RN7SL132P-201ENST00000478131 296 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 RN7SL604P-201ENST00000492589 296 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 RNU2-44P-201ENST00000516795 194 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 DEFB131C-201ENST00000528817 165 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AC021269.2-201ENST00000532318 330 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 MIR4744-201ENST00000581563 82 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AC069294.1-201ENST00000608397 350 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 MIR3653-201ENST00000625572 110 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 IPO8P1-201ENST00000455509 3109 ntBASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BHLHE41Q9C0J9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 AC134026.1-201ENST00000623249 2239 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 MIR383-201ENST00000362257 73 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-1290P-201ENST00000362957 109 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-750P-201ENST00000390946 107 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 Z75741.1-201ENST00000446793 314 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 AC091167.1-201ENST00000492017 396 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 AC007224.1-201ENST00000564410 144 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 MIR3138-201ENST00000585238 82 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 MIR8059-201ENST00000620427 81 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms