Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXB1Q99853 AC110741.2-201ENST00000605278 268 ntBASIC3.16□□□□□ -1.9
FOXB1Q99853 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
FOXB1Q99853 AP003355.3-201ENST00000623465 114 ntBASIC3.16□□□□□ -1.9
FOXB1Q99853 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
FOXB1Q99853 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXB1Q99853 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXB1Q99853 AC135776.4-201ENST00000624300 1904 ntBASIC3.16□□□□□ -1.9
FOXB1Q99853 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
FOXB1Q99853 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.15□□□□□ -1.9
FOXB1Q99853 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXB1Q99853 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXB1Q99853 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXB1Q99853 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 RNU1-62P-201ENST00000362599 164 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 RNU6-283P-201ENST00000364788 107 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 Y_RNA.331-201ENST00000365267 102 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 U3.39-201ENST00000408569 239 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXB1Q99853 AC097463.2-201ENST00000421074 142 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXB1Q99853 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXB1Q99853 MTND5P15-201ENST00000434246 349 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXB1Q99853 RPL23AP3-201ENST00000453844 468 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 SNORD105B-201ENST00000458770 79 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 RN7SL542P-201ENST00000467147 294 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXB1Q99853 AC074133.1-201ENST00000515696 183 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 RNU6-138P-201ENST00000515952 107 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 AC026470.2-201ENST00000561492 181 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 MIR4644-201ENST00000579929 84 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 AC005562.2-201ENST00000618264 111 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 U6.98-201ENST00000637157 84 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXB1Q99853 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXB1Q99853 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
FOXB1Q99853 AL161912.2-201ENST00000565707 3007 ntBASIC3.15□□□□□ -1.91
FOXB1Q99853 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXB1Q99853 AC026241.1-201ENST00000517873 2142 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXB1Q99853 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXB1Q99853 SNORA25.1-201ENST00000362326 128 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 RNA5SP42-201ENST00000364278 115 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 RNU6-200P-201ENST00000364743 107 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 SNORA5A-201ENST00000384111 134 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 RNU6-514P-201ENST00000384208 107 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 MIR134-201ENST00000385258 73 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 RAB28P5-201ENST00000427490 651 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.14□□□□□ -1.91
FOXB1Q99853 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXB1Q99853 AC104619.4-201ENST00000510773 249 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 RAC1P5-201ENST00000512182 576 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 RNU4-71P-201ENST00000516258 113 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 HSPE1P18-201ENST00000517602 280 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXB1Q99853 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXB1Q99853 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 AC034229.5-201ENST00000624258 185 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXB1Q99853 AC069528.2-201ENST00000624849 1991 ntBASIC3.14□□□□□ -1.91
FOXB1Q99853 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
FOXB1Q99853 Y_RNA.44-201ENST00000362676 108 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 Y_RNA.269-201ENST00000364685 89 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 RNU6-326P-201ENST00000365480 107 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 SNORA18.2-201ENST00000383865 132 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 RPL23AP36-201ENST00000413895 458 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXB1Q99853 POLR2KP2-201ENST00000438155 177 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AC004386.2-201ENST00000441858 148 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AC006445.1-201ENST00000491925 405 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXB1Q99853 SCARNA17.1-201ENST00000516211 143 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 SCARNA17.2-201ENST00000516334 143 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AC055872.1-201ENST00000570978 278 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 MIR5006-201ENST00000583027 110 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AC011471.1-201ENST00000585766 187 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 AC008749.1-201ENST00000597650 306 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AC009779.6-201ENST00000603972 165 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 SCARNA17.4-201ENST00000614296 143 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 AC039056.2-201ENST00000622261 511 ntBASIC3.13□□□□□ -1.91
FOXB1Q99853 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
FOXB1Q99853 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXB1Q99853 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXB1Q99853 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
FOXB1Q99853 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms