Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 Y_RNA.143-201ENST00000363520 106 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 Y_RNA.288-201ENST00000364854 92 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNU6-926P-201ENST00000384075 107 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 Y_RNA.483-201ENST00000384380 101 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNU1-57P-201ENST00000384491 166 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNU6-1093P-201ENST00000391194 107 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AL079342.1-201ENST00000401460 267 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 CBX3P9-201ENST00000402326 552 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.1□□□□□ -2.07
LITAFQ99732 RNA5SP317-201ENST00000410176 116 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 SNORD12B-201ENST00000410433 91 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNU6-1001P-201ENST00000411265 100 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNA5SP311-201ENST00000411290 116 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AL451074.5-201ENST00000415894 435 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 Z98742.2-201ENST00000431564 187 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 RPL39P40-201ENST00000445481 146 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AC007215.1-201ENST00000464893 276 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AL121594.1-201ENST00000475906 575 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AC098869.1-201ENST00000481627 292 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RN7SL633P-201ENST00000488974 297 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNA5SP315-201ENST00000516340 116 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RN7SKP49-201ENST00000516675 260 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNU6-1271P-201ENST00000517049 105 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RNA5SP312-201ENST00000517068 116 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 RAB9BP1-201ENST00000519581 626 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AC023824.2-201ENST00000566185 400 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AC136932.1-201ENST00000574771 208 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 AC023043.3-201ENST00000593113 385 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 UCA1.1-201ENST00000620952 75 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 MIR6719-201ENST00000622428 87 ntBASIC2.1□□□□□ -2.07
LITAFQ99732 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.1□□□□□ -2.07
LITAFQ99732 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 AC108206.1-201ENST00000570186 4159 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 AC091564.4-201ENST00000533934 2194 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
LITAFQ99732 RNU4-15P-201ENST00000362613 141 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-655P-201ENST00000362858 107 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-1210P-201ENST00000363775 107 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-873P-201ENST00000363833 107 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU1-32P-201ENST00000363937 159 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-280P-201ENST00000364145 104 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 Y_RNA.307-201ENST00000365022 117 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 CD24P4-201ENST00000382840 243 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-1145P-201ENST00000384246 107 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-378P-201ENST00000384324 107 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 SNORD115-46-201ENST00000390982 71 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 SNORA26.7-201ENST00000391288 122 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 MIR208B-201ENST00000401172 77 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 AL357075.1-201ENST00000404107 726 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 MRPL35P1-201ENST00000404272 572 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RNA5SP201-201ENST00000410316 124 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 CYCSP4-201ENST00000429682 331 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 AL117339.2-201ENST00000430475 180 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.09□□□□□ -2.07
LITAFQ99732 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.09□□□□□ -2.07
LITAFQ99732 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.09□□□□□ -2.07
LITAFQ99732 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.09□□□□□ -2.07
LITAFQ99732 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.09□□□□□ -2.07
LITAFQ99732 SNORD105B-201ENST00000458770 79 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RPL23AP70-201ENST00000483361 460 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RN7SL20P-201ENST00000488827 297 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 MTND4LP22-201ENST00000508209 276 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 RAC1P5-201ENST00000512182 576 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 MRPS36P2-201ENST00000512569 299 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.09□□□□□ -2.07
LITAFQ99732 RNU6-570P-201ENST00000517051 105 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 IGKV2-26-201ENST00000518305 343 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.09□□□□□ -2.07
LITAFQ99732 AC023157.2-201ENST00000540596 141 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.09□□□□□ -2.07
LITAFQ99732 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.09□□□□□ -2.07
LITAFQ99732 MIR3939-201ENST00000582614 106 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.09□□□□□ -2.07
LITAFQ99732 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.09□□□□□ -2.07
LITAFQ99732 uc_338.25-201ENST00000613756 156 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 MIR376A1-201ENST00000616574 68 ntBASIC2.09□□□□□ -2.07
LITAFQ99732 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.09□□□□□ -2.07
LITAFQ99732 AL359854.1-201ENST00000614203 1594 ntBASIC2.09□□□□□ -2.08
LITAFQ99732 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
LITAFQ99732 ZNF204P-201ENST00000416749 2397 ntBASIC2.09□□□□□ -2.08
LITAFQ99732 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.09□□□□□ -2.08
LITAFQ99732 FAM35CP-201ENST00000554755 2470 ntBASIC2.09□□□□□ -2.08
LITAFQ99732 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.08
LITAFQ99732 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.09□□□□□ -2.08
LITAFQ99732 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LITAFQ99732 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.08□□□□□ -2.08
LITAFQ99732 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LITAFQ99732 AC000403.1-201ENST00000613696 3585 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 BX322639.1-202ENST00000423987 2213 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 MIR372-201ENST00000362225 67 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 RNA5SP139-201ENST00000364340 117 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 MIR215-201ENST00000384858 110 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 MIR549A-201ENST00000385268 96 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 SNORD17-201ENST00000390930 237 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 RNU2-20P-201ENST00000410425 191 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms