Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNX18Q96RF0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNX18Q96RF0 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 RNU6-222P-201ENST00000362438 107 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RNU1-105P-201ENST00000363470 161 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RNU6-487P-201ENST00000365430 104 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 SNORA63.7-201ENST00000365579 123 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 SNORA29-201ENST00000384183 140 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RNU6-622P-201ENST00000384272 103 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 MIR32-201ENST00000384965 70 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 MIR767-201ENST00000390228 109 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RPL21P1-201ENST00000399532 476 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 GPM6BP3-201ENST00000442797 145 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 AC073910.1-201ENST00000445047 438 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RPL39P29-201ENST00000447779 157 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 AC087477.1-201ENST00000465747 340 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 RN7SL807P-201ENST00000470923 297 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 RN7SKP43-201ENST00000516173 320 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 AC007375.1-201ENST00000554513 578 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 AC090897.2-201ENST00000581715 130 ntBASIC2.89□□□□□ -1.95
SNX18Q96RF0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX18Q96RF0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX18Q96RF0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX18Q96RF0 Z75746.1-201ENST00000440243 2080 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX18Q96RF0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNU6-1141P-201ENST00000364520 107 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNU6-142P-201ENST00000384019 107 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 SNORA36A-201ENST00000384221 132 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNU6-1222P-201ENST00000384615 107 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNA5SP354-201ENST00000391247 136 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RPL21P75-201ENST00000396599 483 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RPL21P28-201ENST00000401418 483 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 ELOCP20-201ENST00000422460 345 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AL590556.1-201ENST00000423231 483 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 RPL21P39-201ENST00000463605 483 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC087190.1-201ENST00000484462 480 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC107032.1-201ENST00000485945 480 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC132942.1-201ENST00000486753 483 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC093591.1-201ENST00000491435 481 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RPL21P16-201ENST00000495531 483 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 GZMAP1-201ENST00000503054 631 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 ANXA2P1-201ENST00000505539 926 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNY3P15-201ENST00000516297 97 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 RNU5B-3P-201ENST00000516601 115 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC109329.1-201ENST00000518744 317 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC091144.1-201ENST00000519573 138 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC110588.1-201ENST00000559699 137 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 MYL12BP1-201ENST00000569826 507 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AL355877.2-201ENST00000603670 358 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC005000.2-201ENST00000605468 310 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AL359198.2-201ENST00000611836 194 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC091903.1-201ENST00000624322 454 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 AC243829.7-201ENST00000633081 225 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX18Q96RF0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX18Q96RF0 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
SNX18Q96RF0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX18Q96RF0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 U3.13-201ENST00000364804 214 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 RNU6-806P-201ENST00000365147 105 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 RNU6-713P-201ENST00000384761 107 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 AC004383.1-201ENST00000438135 289 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX18Q96RF0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX18Q96RF0 PCNPP5-201ENST00000452246 481 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 SNORA25.11-201ENST00000515935 105 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 SNORA40.15-201ENST00000516884 107 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX18Q96RF0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX18Q96RF0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX18Q96RF0 AL391813.1-201ENST00000603098 260 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 AL162713.1-201ENST00000604480 262 ntBASIC2.87□□□□□ -1.95
SNX18Q96RF0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNX18Q96RF0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNX18Q96RF0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms