Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS35Q96QK1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 RNU6-160P-201ENST00000384591 107 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 AL356432.1-201ENST00000405809 419 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 MTCYBP2-201ENST00000407745 171 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 EIF4EP2-201ENST00000422816 654 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 AL133396.1-201ENST00000432048 687 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 MTCO2P18-201ENST00000457151 658 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 RPL31P3-201ENST00000458430 332 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC132942.1-201ENST00000486753 483 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC079140.3-201ENST00000511111 550 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC091874.1-201ENST00000511402 339 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 RNU6-250P-201ENST00000516958 103 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS35Q96QK1 AP001836.1-201ENST00000604675 523 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 AC025754.2-201ENST00000606491 432 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 HULC.1-201ENST00000612720 240 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 U1.36-201ENST00000620684 176 ntBASIC1.74□□□□□ -2.13
VPS35Q96QK1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNU6-23P-201ENST00000363283 107 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 Y_RNA.255-201ENST00000364581 97 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNU6-26P-201ENST00000383985 107 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNA5SP219-201ENST00000390940 113 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNU4-55P-201ENST00000410731 137 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS35Q96QK1 AL121601.2-201ENST00000438019 707 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS35Q96QK1 TPT1P7-201ENST00000458300 517 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNU6-333P-201ENST00000459117 107 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RNA5SP57-201ENST00000459463 123 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC016632.1-201ENST00000503994 196 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC091133.4-201ENST00000511142 308 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS35Q96QK1 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 MIR4424-201ENST00000585257 86 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC078795.3-201ENST00000602913 472 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 AC130454.1-201ENST00000622948 401 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.73□□□□□ -2.13
VPS35Q96QK1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS35Q96QK1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 Y_RNA.582-201ENST00000391023 95 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 RNA5SP201-201ENST00000410316 124 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.72□□□□□ -2.13
VPS35Q96QK1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS35Q96QK1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS35Q96QK1 AL645568.3-201ENST00000433683 316 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 AL606489.2-201ENST00000433886 234 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.72□□□□□ -2.13
VPS35Q96QK1 HMGN2P18-201ENST00000450680 270 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 RNU7-138P-201ENST00000459479 64 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 SNORA40.12-201ENST00000516329 111 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 Y_RNA.688-201ENST00000516565 95 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS35Q96QK1 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 MIR3923-201ENST00000579521 83 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 MIR3683-201ENST00000580847 82 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 RN7SKP299-201ENST00000606679 301 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 AL590240.4-201ENST00000616908 390 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 AC022079.1-201ENST00000621546 602 ntBASIC1.72□□□□□ -2.13
VPS35Q96QK1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
VPS35Q96QK1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
VPS35Q96QK1 SNORD73A-201ENST00000386062 65 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 DEFB108C-201ENST00000400154 252 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AL358453.1-201ENST00000422522 250 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AL035666.1-201ENST00000446195 348 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 FTH1P25-201ENST00000447665 469 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC005741.1-201ENST00000511094 432 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC109446.1-201ENST00000566172 220 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC087683.1-201ENST00000591187 441 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 VN1R80P-201ENST00000597126 338 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC068944.2-201ENST00000610373 403 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AL450472.1-202ENST00000637286 180 ntBASIC1.71□□□□□ -2.14
VPS35Q96QK1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS35Q96QK1 RNA5SP493-201ENST00000364115 91 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 SNORD37.1-201ENST00000390968 65 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 AP000275.1-201ENST00000411943 390 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 CYCSP49-201ENST00000420810 319 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 MTCO2P3-201ENST00000442543 421 ntBASIC1.7□□□□□ -2.14
VPS35Q96QK1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS35Q96QK1 snoU13.23-201ENST00000458863 104 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms