Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 RNU6-197P-201ENST00000516680 100 ntBASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 TRAV8-5-201ENST00000537369 341 ntBASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 AC020895.1-201ENST00000595362 272 ntBASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.31□□□□□ -1.72
CNTNAP3BQ96NU0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 RNY1P10-201ENST00000363268 113 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 RNA5SP125-201ENST00000364843 120 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 RNU6-1113P-201ENST00000384348 107 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 Z98745.1-201ENST00000402553 494 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 AC006517.1-201ENST00000480485 328 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 AC078817.1-201ENST00000492623 435 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 AC026403.1-201ENST00000518938 295 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNTNAP3BQ96NU0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 RNU6-50P-201ENST00000362356 103 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 RNU1-100P-201ENST00000365255 165 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 Y_RNA.415-201ENST00000384012 112 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 MIR544A-201ENST00000384855 91 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 RNU6-972P-201ENST00000391208 107 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 AC012308.1-201ENST00000451232 178 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 AC021205.2-201ENST00000480069 347 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 ATP5EP1-201ENST00000510257 156 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 AL606490.9-201ENST00000603331 271 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 AC025946.2-201ENST00000603398 234 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 AL359198.2-201ENST00000611836 194 ntBASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3BQ96NU0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 RNA5SP189-201ENST00000364920 115 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 Y_RNA.323-201ENST00000365157 109 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 SNORA18.3-201ENST00000384122 132 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 SNORA48.2-201ENST00000390926 124 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 MIR1255A-201ENST00000408338 113 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 AC009238.2-201ENST00000431026 355 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 RNA5SP468-201ENST00000516782 93 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 RNU6-158P-201ENST00000517104 100 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 AL160236.1-201ENST00000556317 195 ntBASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3BQ96NU0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.28□□□□□ -1.73
CNTNAP3BQ96NU0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 RNU6-1296P-201ENST00000383879 107 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 U3.32-201ENST00000408116 212 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AC126124.2-201ENST00000413542 321 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AC244670.1-201ENST00000436879 112 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AL450023.3-201ENST00000440592 271 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 RPL39P34-201ENST00000477141 156 ntBASIC4.27□□□□□ -1.73
CNTNAP3BQ96NU0 RPL31P41-201ENST00000477967 372 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms