Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A4AQ96JQ5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 OR51H2P-202ENST00000641424 3046 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 AL117342.1-201ENST00000404861 406 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 AC007738.1-201ENST00000413892 348 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 AL445687.1-201ENST00000439946 251 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 AP002884.2-201ENST00000471647 395 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 RPS26P48-201ENST00000491713 339 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 AC096725.1-201ENST00000514266 313 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 U6.73-201ENST00000619194 103 ntBASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
MS4A4AQ96JQ5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
MS4A4AQ96JQ5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A4AQ96JQ5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 Y_RNA.342-201ENST00000365352 113 ntBASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 AL157831.1-201ENST00000426134 473 ntBASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 RPS29P7-201ENST00000439662 171 ntBASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 snoU13.28-201ENST00000459235 104 ntBASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 AC112771.1-201ENST00000463581 102 ntBASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A4AQ96JQ5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 GVINP1-202ENST00000531871 7271 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 AC010680.1-201ENST00000590024 3590 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 AL133243.3-201ENST00000617415 3004 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RNU6-888P-201ENST00000363010 101 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RNU6-1124P-201ENST00000384169 107 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RPL21P65-201ENST00000406094 466 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RPL30P4-201ENST00000429309 333 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 SNRPCP3-201ENST00000474888 476 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 AC099522.1-202ENST00000514718 367 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RNA5SP519-201ENST00000516480 119 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 GNRHR2P1-201ENST00000555315 631 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 AC096577.2-201ENST00000611455 153 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 FAM27D1-201ENST00000612308 341 ntBASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
MS4A4AQ96JQ5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AF117829.1-206ENST00000621883 3802 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 RNU1-14P-201ENST00000362759 152 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 RNA5SP307-201ENST00000362863 116 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 SNORA63D-201ENST00000364359 132 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 SNORA19.1-201ENST00000410656 129 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 RNA5SP310-201ENST00000459084 116 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 RNA5SP497-201ENST00000516081 97 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AC079598.5-201ENST00000547460 117 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AC012442.3-202ENST00000636742 206 ntBASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A4AQ96JQ5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 SNORA31-201ENST00000362607 130 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 RNU4-36P-201ENST00000364294 144 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 RNU6-1240P-201ENST00000365155 104 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 MIR1294-201ENST00000408503 142 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 RNU2-49P-201ENST00000410666 184 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 CRYBB2P1-203ENST00000415709 538 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
MS4A4AQ96JQ5 RPL36AP48-201ENST00000485521 314 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms