Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU6-1305P-201ENST00000364353 104 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 SNORA71.2-201ENST00000364941 134 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AC068538.1-201ENST00000376856 336 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 MIR300-201ENST00000401138 83 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AL162591.2-201ENST00000449634 317 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AC146944.2-203ENST00000502493 354 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AC139495.1-202ENST00000513164 354 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AC012531.5-201ENST00000611375 151 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 MIR6758-201ENST00000620653 63 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 CR392039.5-201ENST00000623201 510 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 AC068700.1-201ENST00000565862 3754 ntBASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.74
DEPDC4Q8N2C3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
DEPDC4Q8N2C3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
DEPDC4Q8N2C3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
DEPDC4Q8N2C3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-1205P-201ENST00000363625 106 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 SNORD74.4-201ENST00000364129 80 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 MIR569-201ENST00000385228 96 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 RPL18P10-201ENST00000425606 538 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 HMGN2P7-201ENST00000456186 273 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 AL031183.1-201ENST00000457667 207 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 RNU7-141P-201ENST00000459304 62 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 HMGN2P9-201ENST00000476875 229 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 RNA5SP112-201ENST00000515937 99 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-313P-201ENST00000516317 112 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 AC109810.1-201ENST00000534066 224 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DEPDC4Q8N2C3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-1048P-201ENST00000364054 107 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 SNORA51.4-201ENST00000364993 124 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AC074290.1-201ENST00000448883 135 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 RNU5F-4P-201ENST00000516581 114 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AC103810.1-201ENST00000579873 453 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 DNAJC19P2-201ENST00000593340 302 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 RPL30P11-203ENST00000598995 310 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AL020997.2-201ENST00000602607 184 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 MAPK10-253ENST00000641010 4072 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AL513302.2-201ENST00000562313 1842 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DEPDC4Q8N2C3 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 Z98742.2-201ENST00000431564 187 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 HSPE1P13-201ENST00000451143 297 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 RN7SL303P-201ENST00000469773 251 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-426P-201ENST00000516464 97 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 AC022616.8-201ENST00000533569 253 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 AC090616.3-201ENST00000582184 217 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 AC007546.2-201ENST00000623996 360 ntBASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.13□□□□□ -1.75
DEPDC4Q8N2C3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 Y_RNA.24-201ENST00000362508 103 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-1083P-201ENST00000384022 107 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms