Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 Z98751.3-201ENST00000604447 521 ntBASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 RPL23AP88-201ENST00000605759 454 ntBASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 AL121655.1-201ENST00000605811 308 ntBASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 SCARNA4-201ENST00000629045 128 ntBASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SFTPA1Q8IWL2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 HAUS6P2-201ENST00000433254 2404 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-222P-201ENST00000362438 107 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 Y_RNA.149-201ENST00000363558 117 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 Y_RNA.210-201ENST00000364161 110 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-1141P-201ENST00000364520 107 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-142P-201ENST00000384019 107 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-1222P-201ENST00000384615 107 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-750P-201ENST00000390946 107 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 RNA5SP390-201ENST00000410191 113 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AC138623.1-201ENST00000418060 216 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 U8.22-201ENST00000459141 133 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AC025281.1-201ENST00000567026 265 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 AL359198.2-201ENST00000611836 194 ntBASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.88□□□□□ -1.95
SFTPA1Q8IWL2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 Y_RNA.176-201ENST00000363815 109 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 Y_RNA.380-201ENST00000365663 111 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 Y_RNA.512-201ENST00000384518 102 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-748P-201ENST00000384648 107 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 MIR1252-201ENST00000408861 65 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AC063976.3-201ENST00000426849 329 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 HMGN2P20-201ENST00000437531 273 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 IPO7P1-201ENST00000442031 636 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 GZMAP1-201ENST00000503054 631 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AC016632.1-201ENST00000503994 196 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AL355877.2-201ENST00000603670 358 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AL356157.2-201ENST00000605122 111 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 AP000560.1-201ENST00000624150 1937 ntBASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SFTPA1Q8IWL2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 SNORA14A-201ENST00000364773 135 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-487P-201ENST00000365430 104 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-505P-201ENST00000384427 107 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 Y_RNA.574-201ENST00000384766 95 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 MIR487A-201ENST00000385009 80 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 MIR767-201ENST00000390228 109 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AL138827.1-201ENST00000402666 306 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 MTCO3P19-201ENST00000415864 321 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AL365496.1-201ENST00000426885 215 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 ARL5AP4-201ENST00000430731 512 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AC244670.1-201ENST00000436879 112 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AL441985.1-201ENST00000457727 251 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 snoU13.6-201ENST00000458785 104 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AC093852.1-201ENST00000503587 266 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-397P-201ENST00000516226 104 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RNU5B-3P-201ENST00000516601 115 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 MIR3124-201ENST00000582636 67 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RPS29P30-201ENST00000600975 111 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AL355297.3-201ENST00000604082 446 ntBASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.86□□□□□ -1.95
SFTPA1Q8IWL2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 RNU6-212P-201ENST00000362642 104 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 RNU5B-2P-201ENST00000363036 113 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 SNORA46-201ENST00000384762 135 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 RPL21P75-201ENST00000396599 483 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 EI24P2-201ENST00000397776 1076 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 RPL21P28-201ENST00000401418 483 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 RN7SKP61-201ENST00000410642 295 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 AC096649.2-201ENST00000416186 393 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 AL590556.1-201ENST00000423231 483 ntBASIC2.85□□□□□ -1.95
SFTPA1Q8IWL2 AL445305.1-201ENST00000432577 575 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms