Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AL591806.2-201ENST00000433122 173 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 MTCO2P3-201ENST00000442543 421 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 RNU6-835P-201ENST00000516974 104 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AC080013.6-201ENST00000606185 215 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AC004908.3-201ENST00000610248 625 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AC063943.3-201ENST00000615562 356 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 RNU4-15P-201ENST00000362613 141 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 RNU4-24P-201ENST00000364565 139 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 SNORA26.3-201ENST00000391119 136 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 RNU6-648P-201ENST00000410190 107 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AL133396.1-201ENST00000432048 687 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AL645568.3-201ENST00000433683 316 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AC245102.2-201ENST00000448956 180 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AC105313.1-201ENST00000509121 353 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AC009646.1-201ENST00000510455 318 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AC107393.1-201ENST00000512403 346 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 Y_RNA.693-201ENST00000516641 110 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AC024614.2-201ENST00000577584 372 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AL109918.3-201ENST00000603072 338 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 AP001836.1-201ENST00000604675 523 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC83Q8IWF9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC092268.1-201ENST00000342691 405 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNU4-66P-201ENST00000365199 138 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNU6-1106P-201ENST00000390845 107 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 CALM2P3-201ENST00000400429 449 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AL512604.1-201ENST00000404812 257 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 ARL5AP1-201ENST00000418991 388 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AL590135.1-201ENST00000422215 156 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC019205.3-201ENST00000424573 156 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC016700.2-201ENST00000446011 156 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 SNRPGP7-201ENST00000469016 106 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC015911.1-201ENST00000495111 156 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 Y_RNA.654-201ENST00000497848 106 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 HMGB3P17-201ENST00000504195 649 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC116337.1-201ENST00000509680 687 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNU6-1069P-201ENST00000516612 133 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNU6-965P-201ENST00000516721 96 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNU2-44P-201ENST00000516795 194 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 HSPE1P4-201ENST00000550617 308 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 TRAV32-201ENST00000553993 340 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC007375.1-201ENST00000554513 578 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AL118558.2-201ENST00000556294 238 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC015712.3-201ENST00000559380 164 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC092747.3-201ENST00000603769 301 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC009318.2-201ENST00000610917 651 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC005296.1-201ENST00000616145 209 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AL359314.1-201ENST00000616913 261 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 AC008555.8-201ENST00000623602 2168 ntBASIC2.05□□□□□ -2.08
CCDC83Q8IWF9 RNA5SP432-201ENST00000362480 116 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 SNORD32B-201ENST00000364460 84 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 RNU4-56P-201ENST00000364700 142 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 RNU4-20P-201ENST00000365601 151 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 SNORA40.18-201ENST00000391200 128 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 MIR1262-201ENST00000408276 93 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 AP000275.1-201ENST00000411943 390 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 MTND1P1-201ENST00000445453 368 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 AC145146.1-201ENST00000496370 254 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 AC016632.1-201ENST00000503994 196 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 PTP4A1P4-201ENST00000512479 322 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 AC087854.1-201ENST00000519706 414 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 MIR3618-201ENST00000580330 88 ntBASIC2.04□□□□□ -2.08
CCDC83Q8IWF9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 Y_RNA.378-201ENST00000365652 113 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 SNORD14D-201ENST00000384390 87 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 MIR514A2-201ENST00000385131 88 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 MIR514A3-201ENST00000385132 88 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 RNU6-482P-201ENST00000391068 107 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
CCDC83Q8IWF9 MTCYBP2-201ENST00000407745 171 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms