Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU6-47P-201ENST00000383866 107 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RNU6-1181P-201ENST00000384191 106 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 SNORA53-201ENST00000391141 249 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RPL23AP95-201ENST00000426806 265 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL606753.1-201ENST00000427435 87 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL353705.4-201ENST00000449661 238 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 MTATP6P7-201ENST00000453315 681 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 BX510359.1-201ENST00000456973 237 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 snoU13.22-201ENST00000459428 104 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AP000870.1-201ENST00000472927 406 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RPL31P13-201ENST00000484151 370 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC023141.12-201ENST00000512399 199 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 SNORD116-28-201ENST00000516123 91 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RN7SKP49-201ENST00000516675 260 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RNU6-861P-201ENST00000516745 106 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AP004607.1-201ENST00000524456 203 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC087441.2-201ENST00000529141 262 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.12□□□□□ -1.91
VRK3Q8IV63 MIR5680-201ENST00000577577 84 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL162424.1-201ENST00000602325 221 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC072026.1-201ENST00000605023 201 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL590240.4-201ENST00000616908 390 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.11□□□□□ -1.91
VRK3Q8IV63 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VRK3Q8IV63 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
VRK3Q8IV63 SRP72P2-201ENST00000344851 1979 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VRK3Q8IV63 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VRK3Q8IV63 UBE2WP1-201ENST00000362030 340 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.82-201ENST00000363000 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.92-201ENST00000363043 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 RNU6-137P-201ENST00000363680 108 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.235-201ENST00000364412 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.306-201ENST00000365015 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.312-201ENST00000365089 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.322-201ENST00000365151 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 RNY1P5-201ENST00000383890 115 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 RNU6-843P-201ENST00000384454 104 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 MIR32-201ENST00000384965 70 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VRK3Q8IV63 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.11□□□□□ -1.91
VRK3Q8IV63 MTCO1P5-201ENST00000433573 344 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.11□□□□□ -1.91
VRK3Q8IV63 TMSB4XP3-201ENST00000445144 114 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 SSXP4-201ENST00000451349 245 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.650-201ENST00000459002 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 AC073901.1-201ENST00000462471 408 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 RPL23AP49-201ENST00000492925 468 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 RN7SL504P-201ENST00000494496 287 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 AC074198.2-201ENST00000508153 258 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 AC091874.1-201ENST00000511402 339 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.777-201ENST00000516982 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 AP004242.1-201ENST00000533701 349 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 AC027288.2-201ENST00000553028 243 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.771-201ENST00000598668 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 MZT1P2-201ENST00000604387 248 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 FTX_3.1-201ENST00000610451 147 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 Y_RNA.789-201ENST00000622480 102 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 U6.99-201ENST00000637524 83 ntBASIC3.11□□□□□ -1.91
VRK3Q8IV63 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.1□□□□□ -1.91
VRK3Q8IV63 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
VRK3Q8IV63 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNU6-778P-201ENST00000363269 103 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNU6-879P-201ENST00000364328 108 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 Y_RNA.275-201ENST00000364726 110 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNA5SP240-201ENST00000365355 128 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNU6-926P-201ENST00000384075 107 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 SNORA29-201ENST00000384183 140 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNU6-281P-201ENST00000384212 103 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 U8.10-201ENST00000384260 133 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 Y_RNA.569-201ENST00000384749 103 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 MIR10B-201ENST00000385011 110 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 SNORD12B-201ENST00000410433 91 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNU6-651P-201ENST00000411040 105 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.1□□□□□ -1.91
VRK3Q8IV63 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.1□□□□□ -1.91
VRK3Q8IV63 RN7SL863P-201ENST00000462370 296 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 AC087477.1-201ENST00000465747 340 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.1□□□□□ -1.91
VRK3Q8IV63 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RN7SKP272-201ENST00000516988 232 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.1□□□□□ -1.91
VRK3Q8IV63 AC007179.3-201ENST00000604976 235 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 SNORA43.4-201ENST00000629559 138 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 U6.106-201ENST00000636360 105 ntBASIC3.1□□□□□ -1.91
VRK3Q8IV63 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VRK3Q8IV63 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VRK3Q8IV63 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms