Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL033519.2-201ENST00000403958 392 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AP000275.1-201ENST00000411943 390 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 MTCO3P41-201ENST00000414801 328 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AC008628.2-201ENST00000502605 298 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 CCDC34P1-201ENST00000507441 517 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AC091874.1-201ENST00000511402 339 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 SNORA14.1-201ENST00000516113 141 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.69□□□□□ -2.14
NIPAL3Q6P499 CYP4A27P-201ENST00000567218 190 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 VN1R80P-201ENST00000597126 338 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AC025811.1-201ENST00000604312 472 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 PCGEM1.1-201ENST00000613431 131 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AL590240.4-201ENST00000616908 390 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 AC009509.4-201ENST00000619202 509 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 Y_RNA.332-201ENST00000365271 113 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 RNU6-438P-201ENST00000365561 103 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 SNORD73A-201ENST00000386062 65 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 TPTE2P5-203ENST00000458118 728 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC091133.4-201ENST00000511142 308 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 SNORA40.12-201ENST00000516329 111 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 GNAI2P1-201ENST00000541815 315 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC022254.1-201ENST00000567857 235 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 MIR3169-201ENST00000578032 83 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 MIR4424-201ENST00000585257 86 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 Z98751.3-201ENST00000604447 521 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC139792.3-201ENST00000623525 224 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 AC097520.1-201ENST00000624435 385 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 LINC02555-201ENST00000563933 1951 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
NIPAL3Q6P499 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 SNORD116-9-201ENST00000384000 95 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 SNORD116-3-201ENST00000384287 95 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 SNORD116-7-201ENST00000384404 95 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 SNORD116-5-201ENST00000384462 95 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 DEFB108C-201ENST00000400154 252 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC123900.1-201ENST00000420390 96 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 MTCO3P38-201ENST00000468910 766 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC104564.1-201ENST00000493028 407 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 RNA5SP401-201ENST00000515920 127 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 RNU6-189P-201ENST00000516120 101 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AP003034.1-201ENST00000534621 422 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 EIF4A1P12-201ENST00000551910 141 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 MIR3611-201ENST00000584484 83 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC068944.2-201ENST00000610373 403 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 RMST_6.1-201ENST00000611980 203 ntBASIC1.67□□□□□ -2.14
NIPAL3Q6P499 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
NIPAL3Q6P499 AC009541.1-201ENST00000438279 2662 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RNU6-82P-201ENST00000363970 107 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 SNORD114-6-201ENST00000364393 72 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 SNORA36A-201ENST00000384221 132 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RNU6-378P-201ENST00000384324 107 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 MIR208B-201ENST00000401172 77 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RNU2-41P-201ENST00000410991 178 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RNU6-1037P-201ENST00000459571 107 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 UBL5P3-201ENST00000475112 231 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RNU5F-4P-201ENST00000516581 114 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 CENPUP1-201ENST00000526649 1202 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AC087441.2-201ENST00000529141 262 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AC110588.1-201ENST00000559699 137 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AC012493.3-201ENST00000604494 112 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AC017083.3-201ENST00000609955 700 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AL136221.1-201ENST00000621449 509 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AL450472.1-202ENST00000637286 180 ntBASIC1.66□□□□□ -2.14
NIPAL3Q6P499 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NIPAL3Q6P499 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
NIPAL3Q6P499 RNU4-66P-201ENST00000365199 138 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms