Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 SCARNA17.2-201ENST00000516334 143 ntBASIC1.88□□□□□ -2.11
ZNF544Q6NX49 SCARNA16.3-201ENST00000516595 184 ntBASIC1.88□□□□□ -2.11
ZNF544Q6NX49 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.88□□□□□ -2.11
ZNF544Q6NX49 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.88□□□□□ -2.11
ZNF544Q6NX49 MIR4742-201ENST00000581069 85 ntBASIC1.88□□□□□ -2.11
ZNF544Q6NX49 MIR3942-201ENST00000585264 109 ntBASIC1.88□□□□□ -2.11
ZNF544Q6NX49 BNIP3P16-201ENST00000589779 534 ntBASIC1.88□□□□□ -2.11
ZNF544Q6NX49 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.88□□□□□ -2.11
ZNF544Q6NX49 SCARNA17.4-201ENST00000614296 143 ntBASIC1.88□□□□□ -2.11
ZNF544Q6NX49 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.88□□□□□ -2.11
ZNF544Q6NX49 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
ZNF544Q6NX49 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
ZNF544Q6NX49 AC080128.1-201ENST00000474389 1917 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 SNORD114-1-201ENST00000362705 72 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 RNU6-336P-201ENST00000364891 107 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 RNU6-214P-201ENST00000384130 107 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 MIR147B-201ENST00000390185 80 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 RPL7P12-201ENST00000446719 750 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 MTND5P30-201ENST00000452896 1731 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 PMCHL2-203ENST00000457791 237 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 HMGN1P12-201ENST00000499125 195 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC008628.2-201ENST00000502605 298 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC023141.11-201ENST00000508864 202 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC092436.3-201ENST00000511788 257 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC109329.1-201ENST00000518744 317 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC134698.4-201ENST00000523451 826 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC079598.5-201ENST00000547460 117 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC025423.5-201ENST00000550230 219 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 SCOCP1-201ENST00000554676 349 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 MIR548S-201ENST00000581352 82 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC090897.2-201ENST00000581715 130 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 ELOCP5-201ENST00000604924 333 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC064836.2-201ENST00000609491 462 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 AC244517.12-201ENST00000623581 663 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ZNF544Q6NX49 RBBP8P1-201ENST00000449447 1844 ntBASIC1.87□□□□□ -2.11
ZNF544Q6NX49 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 CBX3P1-201ENST00000325243 554 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU6-1010P-201ENST00000362757 107 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU6-428P-201ENST00000362942 107 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 SNORA72.1-201ENST00000363485 129 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU6-827P-201ENST00000365553 106 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 SNORD116-11-201ENST00000383882 92 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU6-1013P-201ENST00000384180 107 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 SNORD73A-201ENST00000386062 65 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU6-1328P-201ENST00000410938 106 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 PDCL2P1-201ENST00000419302 352 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 SNAP23P1-201ENST00000433229 246 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AC098614.3-201ENST00000438957 440 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL441985.1-201ENST00000457727 251 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AC008526.1-201ENST00000509149 338 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AC025465.4-201ENST00000513422 638 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU2-44P-201ENST00000516795 194 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 RNU6-1088P-201ENST00000516850 104 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL121579.1-201ENST00000555129 305 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 CPDP1-201ENST00000579660 283 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL359757.2-201ENST00000624309 274 ntBASIC1.86□□□□□ -2.11
ZNF544Q6NX49 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ZNF544Q6NX49 AL359854.1-201ENST00000614203 1594 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RNU6-858P-201ENST00000362436 107 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RNU6-562P-201ENST00000362731 107 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RNU6-1252P-201ENST00000363054 104 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 SNORA32.2-201ENST00000384049 122 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 CYCSP48-201ENST00000417124 323 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 MTND4LP11-201ENST00000422184 280 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RPS15AP10-201ENST00000432472 382 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 MTND1P17-201ENST00000448961 204 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 AMD1P1-201ENST00000457220 922 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 snoU13.14-201ENST00000459372 104 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RNU6-1037P-201ENST00000459571 107 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 AP001324.2-201ENST00000461163 319 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 Y_RNA.691-201ENST00000516611 103 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RNU6-1332P-201ENST00000516666 104 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 RNA5SP454-201ENST00000517231 127 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF544Q6NX49 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.85□□□□□ -2.11
ZNF544Q6NX49 AC026371.1-201ENST00000551867 419 ntBASIC1.85□□□□□ -2.11
ZNF544Q6NX49 TRAV32-201ENST00000553993 340 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms