Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC090517.3-201ENST00000625170 141 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 MTND5P26-201ENST00000426018 1752 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 RNU6-527P-201ENST00000363425 104 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RNU6-1285P-201ENST00000363480 105 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 Y_RNA.296-201ENST00000364930 108 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 Y_RNA.338-201ENST00000365320 114 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RPL23AP36-201ENST00000413895 458 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.61□□□□□ -2.15
SMARCB1Q12824 AC006026.2-201ENST00000457376 180 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RNU7-167P-201ENST00000459160 62 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RPL30P1-201ENST00000488676 339 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 AC108729.3-201ENST00000513484 108 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RNU5F-2P-201ENST00000516066 82 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 SNORA40.12-201ENST00000516329 111 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RNU6-405P-201ENST00000516637 110 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.61□□□□□ -2.15
SMARCB1Q12824 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.61□□□□□ -2.15
SMARCB1Q12824 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.61□□□□□ -2.15
SMARCB1Q12824 AC087683.1-201ENST00000591187 441 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 VN1R80P-201ENST00000597126 338 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 AL031274.2-201ENST00000599419 203 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 AC004908.3-201ENST00000610248 625 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 HULC.1-201ENST00000612720 240 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 AL132822.1-201ENST00000617063 513 ntBASIC1.61□□□□□ -2.15
SMARCB1Q12824 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.61□□□□□ -2.15
SMARCB1Q12824 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 RNU4-20P-201ENST00000365601 151 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 MIR561-201ENST00000385216 97 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 SNORA40.19-201ENST00000390846 128 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 MIR1262-201ENST00000408276 93 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 RNU6-293P-201ENST00000411259 106 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC010975.2-201ENST00000427781 588 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 RPS15AP10-201ENST00000432472 382 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 MTCO2P18-201ENST00000457151 658 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AL163973.1-201ENST00000484753 577 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC009646.1-201ENST00000510455 318 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 RNU6-965P-201ENST00000516721 96 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 RNU6-667P-201ENST00000517186 102 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AP000763.2-201ENST00000540641 163 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 NDUFA5P6-201ENST00000542110 379 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.6□□□□□ -2.15
SMARCB1Q12824 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AL645939.4-201ENST00000604495 135 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC245008.1-201ENST00000608123 476 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC068944.2-201ENST00000610373 403 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 AC008121.3-201ENST00000618726 433 ntBASIC1.6□□□□□ -2.15
SMARCB1Q12824 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SMARCB1Q12824 RNU4-75P-201ENST00000364621 146 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 Y_RNA.480-201ENST00000384364 102 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 SNORD73A-201ENST00000386062 65 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 RNU6-780P-201ENST00000391030 104 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 FGF7P8-201ENST00000402994 292 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AL663109.1-201ENST00000411498 844 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC244636.1-201ENST00000421152 228 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 AL591043.1-201ENST00000432461 424 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 Z83846.1-201ENST00000446798 265 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AL031274.1-201ENST00000450334 232 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 RNU7-95P-201ENST00000459222 64 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 HMGB1P35-201ENST00000503360 598 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC093534.1-201ENST00000504977 132 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC091874.1-201ENST00000511402 339 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 RNU6-377P-201ENST00000515965 102 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 RNU6-1038P-201ENST00000516516 104 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 RN7SKP256-201ENST00000517201 314 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 COPS8P3-201ENST00000526024 482 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC103996.1-201ENST00000555468 102 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC012507.3-201ENST00000603556 477 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC091805.2-201ENST00000603848 235 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC107304.1-201ENST00000604229 296 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AP001330.5-201ENST00000607176 411 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC017083.3-201ENST00000609955 700 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC063943.3-201ENST00000615562 356 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 uc_338.34-201ENST00000617467 174 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 AC139792.3-201ENST00000623525 224 ntBASIC1.59□□□□□ -2.15
SMARCB1Q12824 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SMARCB1Q12824 Y_RNA.255-201ENST00000364581 97 ntBASIC1.58□□□□□ -2.16
SMARCB1Q12824 SNORD32A-201ENST00000364805 84 ntBASIC1.58□□□□□ -2.16
SMARCB1Q12824 RNU6-827P-201ENST00000365553 106 ntBASIC1.58□□□□□ -2.16
SMARCB1Q12824 RNU6-43P-201ENST00000384302 107 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms