Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 Y_RNA.665-201ENST00000516177 98 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AL137161.1-201ENST00000532231 390 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.04□□□□□ -2.08
RIPK4P57078 AL121579.1-201ENST00000555129 305 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.04□□□□□ -2.08
RIPK4P57078 AL670379.10-201ENST00000604330 253 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AL670379.9-201ENST00000605428 253 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC021646.1-201ENST00000605469 484 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 uc_338.34-201ENST00000617467 174 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC092794.2-201ENST00000620933 563 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC100810.6-201ENST00000638068 285 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
RIPK4P57078 RNU6-661P-201ENST00000362409 107 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 Y_RNA.160-201ENST00000363677 92 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 RNU1-42P-201ENST00000364033 160 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 Y_RNA.231-201ENST00000364358 102 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 RNU6-60P-201ENST00000364792 103 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 RNU6-867P-201ENST00000364956 107 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RIPK4P57078 FTH1P15-201ENST00000406984 280 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 RPL21P90-201ENST00000415692 466 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AC097463.2-201ENST00000421074 142 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AL121601.2-201ENST00000438019 707 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.03□□□□□ -2.08
RIPK4P57078 PRPS1P1-201ENST00000445305 876 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.03□□□□□ -2.08
RIPK4P57078 HMGN1P12-201ENST00000499125 195 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AC091951.2-201ENST00000500762 203 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.03□□□□□ -2.08
RIPK4P57078 MTND3P25-201ENST00000509243 135 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.03□□□□□ -2.08
RIPK4P57078 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.03□□□□□ -2.08
RIPK4P57078 RNU2-69P-201ENST00000516061 100 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AP005902.1-201ENST00000521358 186 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AC107953.1-201ENST00000522216 297 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.03□□□□□ -2.08
RIPK4P57078 AC118273.2-201ENST00000532092 465 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 BNIP3P6-201ENST00000549284 499 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.03□□□□□ -2.08
RIPK4P57078 Z75746.1-201ENST00000440243 2080 ntBASIC2.03□□□□□ -2.08
RIPK4P57078 RNU1-72P-201ENST00000362976 153 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RNU6-942P-201ENST00000363002 107 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 Y_RNA.140-201ENST00000363474 103 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 SNORD14B-201ENST00000364533 90 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 Y_RNA.279-201ENST00000364763 95 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 Y_RNA.373-201ENST00000365600 103 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 SNORD37.1-201ENST00000390968 65 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RNU4-62P-201ENST00000410125 130 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RNU2-3P-201ENST00000410144 191 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RNU4-46P-201ENST00000410818 138 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC016831.2-201ENST00000417179 352 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.02□□□□□ -2.09
RIPK4P57078 ERLEC1P1-201ENST00000433806 578 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 CALM1P1-201ENST00000442082 433 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 AL583843.1-201ENST00000456070 346 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC011005.2-201ENST00000487324 359 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RNU1-86P-201ENST00000516108 154 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 RNU1-107P-201ENST00000516617 154 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 MTND4P7-201ENST00000523876 130 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 CENPUP1-201ENST00000526649 1202 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 SNORD53B-201ENST00000577887 78 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 MIR548AC-201ENST00000585049 88 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC018638.8-201ENST00000588755 281 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AP000942.3-201ENST00000603702 160 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 BNIP3P10-201ENST00000605360 577 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 BX248123.2-201ENST00000606318 124 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC009994.1-201ENST00000606889 253 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 AC092807.2-201ENST00000609367 243 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 U4atac.1-201ENST00000618345 95 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 uc_338.11-201ENST00000619132 160 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.02□□□□□ -2.09
RIPK4P57078 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.02□□□□□ -2.09
RIPK4P57078 AL136221.1-201ENST00000621449 509 ntBASIC2.02□□□□□ -2.09
RIPK4P57078 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RIPK4P57078 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.02□□□□□ -2.09
RIPK4P57078 HAUS6P2-201ENST00000433254 2404 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RIPK4P57078 MTND5P10-201ENST00000603719 1809 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 AC138393.1-203ENST00000327086 343 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 Y_RNA.70-201ENST00000362886 110 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 RNA5SP125-201ENST00000364843 120 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 RNU6-384P-201ENST00000364900 104 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 RNU6-487P-201ENST00000365430 104 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 RNU6-393P-201ENST00000384475 107 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 RNU6-831P-201ENST00000384548 107 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 CYCSP33-201ENST00000414485 327 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 CYCSP48-201ENST00000417124 323 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 PDCL2P1-201ENST00000419302 352 ntBASIC2.01□□□□□ -2.09
RIPK4P57078 AL513185.2-201ENST00000425543 193 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms