Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATXN1P54253 Y_RNA.199-201ENST00000364014 102 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RNU6-818P-201ENST00000364837 108 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATXN1P54253 Y_RNA.418-201ENST00000384029 102 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RNU6-708P-201ENST00000384217 107 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RNU6-95P-201ENST00000384697 107 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RNU6-394P-201ENST00000410735 107 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RPS15AP6-201ENST00000420703 385 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.41□□□□□ -1.86
ATXN1P54253 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
ATXN1P54253 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.41□□□□□ -1.86
ATXN1P54253 RNU7-23P-201ENST00000459465 62 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 RPS29P12-201ENST00000460178 152 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 AP002884.2-201ENST00000471647 395 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.41□□□□□ -1.86
ATXN1P54253 YWHAEP4-201ENST00000505390 198 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.41□□□□□ -1.86
ATXN1P54253 RNA5SP165-201ENST00000517142 115 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.41□□□□□ -1.86
ATXN1P54253 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.41□□□□□ -1.86
ATXN1P54253 OR1M4P-201ENST00000589199 287 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATXN1P54253 AL359693.1-201ENST00000614959 2407 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.41□□□□□ -1.86
ATXN1P54253 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATXN1P54253 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATXN1P54253 RNU6-1266P-201ENST00000362794 105 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 RNU6-658P-201ENST00000384606 106 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 RNU2-68P-201ENST00000410878 191 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 RNU6-1135P-201ENST00000411083 103 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 UBE2V1P4-201ENST00000425374 344 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 AL714022.1-201ENST00000439897 151 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.4□□□□□ -1.87
ATXN1P54253 AC109925.1-201ENST00000478069 331 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 AC092436.3-201ENST00000511788 257 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 RNU4-57P-201ENST00000515980 135 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 SNORA40.15-201ENST00000516884 107 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 AC025755.1-201ENST00000521306 278 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 AC104576.1-201ENST00000524225 88 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 FTX_3.1-201ENST00000610451 147 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
ATXN1P54253 BX322639.1-202ENST00000423987 2213 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ATXN1P54253 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ATXN1P54253 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ATXN1P54253 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
ATXN1P54253 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.4□□□□□ -1.87
ATXN1P54253 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATXN1P54253 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
ATXN1P54253 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATXN1P54253 AL391987.6-201ENST00000305671 199 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 Y_RNA.2-201ENST00000362330 96 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU6-1317P-201ENST00000364582 104 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU4-42P-201ENST00000364738 142 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU6-1325P-201ENST00000364905 105 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU6-1130P-201ENST00000365434 107 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU6-1329P-201ENST00000365664 107 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 Y_RNA.551-201ENST00000384661 102 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU6-417P-201ENST00000384712 107 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNA5SP354-201ENST00000391247 136 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RNU6-293P-201ENST00000411259 106 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RAB28P5-201ENST00000427490 651 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 AL445305.1-201ENST00000432577 575 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.39□□□□□ -1.87
ATXN1P54253 AC140059.1-201ENST00000489238 361 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 RAC1P5-201ENST00000512182 576 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 SCARNA20.6-201ENST00000517251 106 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 AC144568.1-201ENST00000520139 137 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.39□□□□□ -1.87
ATXN1P54253 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.39□□□□□ -1.87
ATXN1P54253 AC233702.2-202ENST00000562547 291 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.39□□□□□ -1.87
ATXN1P54253 AC090617.3-201ENST00000573670 475 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 MIR4679-2-201ENST00000578358 77 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 ELOCP5-201ENST00000604924 333 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATXN1P54253 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.39□□□□□ -1.87
ATXN1P54253 IGHVIII-44-202ENST00000636235 289 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATXN1P54253 AC007496.3-201ENST00000624987 3443 ntBASIC3.39□□□□□ -1.87
ATXN1P54253 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATXN1P54253 SNORD62.1-201ENST00000362541 86 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 RNU1-105P-201ENST00000363470 161 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 RNA5SP205-201ENST00000364653 136 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 Y_RNA.304-201ENST00000365011 112 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 Y_RNA.352-201ENST00000365439 102 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 SNORD73A-201ENST00000386062 65 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 Y_RNA.623-201ENST00000411128 95 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 AL592148.1-201ENST00000413568 445 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 USMG5P1-201ENST00000425964 177 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.38□□□□□ -1.87
ATXN1P54253 CST9LP2-201ENST00000437612 320 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.38□□□□□ -1.87
ATXN1P54253 RNU7-169P-201ENST00000459456 61 ntBASIC3.38□□□□□ -1.87
ATXN1P54253 AC139453.3-201ENST00000493276 369 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms