Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NEK3P51956 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
NEK3P51956 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
NEK3P51956 SNORA36A-201ENST00000384221 132 ntBASIC2.86□□□□□ -1.95
NEK3P51956 RNU6-611P-201ENST00000384276 104 ntBASIC2.86□□□□□ -1.95
NEK3P51956 USP9YP30-201ENST00000430729 455 ntBASIC2.86□□□□□ -1.95
NEK3P51956 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.86□□□□□ -1.95
NEK3P51956 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.86□□□□□ -1.95
NEK3P51956 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.86□□□□□ -1.95
NEK3P51956 AC026782.1-201ENST00000512952 449 ntBASIC2.86□□□□□ -1.95
NEK3P51956 RNA5SP356-201ENST00000515972 94 ntBASIC2.86□□□□□ -1.95
NEK3P51956 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.86□□□□□ -1.95
NEK3P51956 CYCSP26-201ENST00000534107 320 ntBASIC2.86□□□□□ -1.95
NEK3P51956 ELOCP31-201ENST00000540463 467 ntBASIC2.86□□□□□ -1.95
NEK3P51956 NDUFA5P6-201ENST00000542110 379 ntBASIC2.86□□□□□ -1.95
NEK3P51956 AC109446.1-201ENST00000566172 220 ntBASIC2.86□□□□□ -1.95
NEK3P51956 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.86□□□□□ -1.95
NEK3P51956 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NEK3P51956 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.86□□□□□ -1.95
NEK3P51956 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.86□□□□□ -1.95
NEK3P51956 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NEK3P51956 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
NEK3P51956 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
NEK3P51956 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NEK3P51956 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEK3P51956 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEK3P51956 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.85□□□□□ -1.95
NEK3P51956 SNORD115-32-201ENST00000364079 82 ntBASIC2.85□□□□□ -1.95
NEK3P51956 RNY3P14-201ENST00000384309 102 ntBASIC2.85□□□□□ -1.95
NEK3P51956 RNU6-1009P-201ENST00000390996 107 ntBASIC2.85□□□□□ -1.95
NEK3P51956 MIR208B-201ENST00000401172 77 ntBASIC2.85□□□□□ -1.95
NEK3P51956 MTND4LP11-201ENST00000422184 280 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
NEK3P51956 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
NEK3P51956 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
NEK3P51956 RNU6-307P-201ENST00000516743 106 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AC034114.1-201ENST00000520293 285 ntBASIC2.85□□□□□ -1.95
NEK3P51956 MRPS36P4-201ENST00000534436 298 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.85□□□□□ -1.95
NEK3P51956 AC011494.1-201ENST00000596454 237 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AL356575.1-201ENST00000603008 283 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AC063943.3-201ENST00000615562 356 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AC098657.3-201ENST00000620434 263 ntBASIC2.85□□□□□ -1.95
NEK3P51956 AL008636.1-201ENST00000625038 1018 ntBASIC2.85□□□□□ -1.95
NEK3P51956 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEK3P51956 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
NEK3P51956 AC007064.1-201ENST00000412238 351 ntBASIC2.84□□□□□ -1.95
NEK3P51956 SUMO1P4-201ENST00000429430 302 ntBASIC2.84□□□□□ -1.95
NEK3P51956 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK3P51956 MTATP6P23-201ENST00000440153 476 ntBASIC2.84□□□□□ -1.95
NEK3P51956 OR2AQ1P-201ENST00000451972 200 ntBASIC2.84□□□□□ -1.95
NEK3P51956 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK3P51956 AC018868.1-201ENST00000491307 315 ntBASIC2.84□□□□□ -1.95
NEK3P51956 RPL23AP75-201ENST00000491601 451 ntBASIC2.84□□□□□ -1.95
NEK3P51956 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK3P51956 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK3P51956 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK3P51956 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
NEK3P51956 AC105029.1-201ENST00000520250 669 ntBASIC2.84□□□□□ -1.95
NEK3P51956 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK3P51956 AC005899.2-201ENST00000584353 90 ntBASIC2.84□□□□□ -1.95
NEK3P51956 AP000654.2-201ENST00000605633 586 ntBASIC2.84□□□□□ -1.95
NEK3P51956 MIR6852-201ENST00000621699 66 ntBASIC2.84□□□□□ -1.95
NEK3P51956 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NEK3P51956 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
NEK3P51956 ZNF299P-201ENST00000406845 1804 ntBASIC2.84□□□□□ -1.96
NEK3P51956 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.96
NEK3P51956 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.96
NEK3P51956 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NEK3P51956 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
NEK3P51956 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NEK3P51956 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NEK3P51956 RNU6-26P-201ENST00000383985 107 ntBASIC2.83□□□□□ -1.96
NEK3P51956 RNU1-52P-201ENST00000384190 164 ntBASIC2.83□□□□□ -1.96
NEK3P51956 RNU1-148P-201ENST00000384472 162 ntBASIC2.83□□□□□ -1.96
NEK3P51956 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NEK3P51956 RNU6-1050P-201ENST00000410388 107 ntBASIC2.83□□□□□ -1.96
NEK3P51956 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AC243428.1-201ENST00000421099 264 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AL358453.1-201ENST00000422522 250 ntBASIC2.83□□□□□ -1.96
NEK3P51956 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
NEK3P51956 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.83□□□□□ -1.96
NEK3P51956 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.83□□□□□ -1.96
NEK3P51956 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.83□□□□□ -1.96
NEK3P51956 RN7SKP210-201ENST00000459176 261 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AC087477.1-201ENST00000465747 340 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AC091951.2-201ENST00000500762 203 ntBASIC2.83□□□□□ -1.96
NEK3P51956 RN7SKP132-201ENST00000516001 208 ntBASIC2.83□□□□□ -1.96
NEK3P51956 RNU6-1198P-201ENST00000516904 67 ntBASIC2.83□□□□□ -1.96
NEK3P51956 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AC026470.2-201ENST00000561492 181 ntBASIC2.83□□□□□ -1.96
NEK3P51956 MIR3605-201ENST00000583214 100 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AC113139.1-201ENST00000605049 239 ntBASIC2.83□□□□□ -1.96
NEK3P51956 PISRT1.1-201ENST00000616930 107 ntBASIC2.83□□□□□ -1.96
NEK3P51956 AL132822.1-201ENST00000617063 513 ntBASIC2.83□□□□□ -1.96
NEK3P51956 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NEK3P51956 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
NEK3P51956 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NEK3P51956 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
NEK3P51956 RNU6-137P-201ENST00000363680 108 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms