Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MAPK10-253ENST00000641010 4072 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRIM1P49642 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 AL136164.4-201ENST00000625013 2135 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PRIM1P49642 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PRIM1P49642 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRIM1P49642 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRIM1P49642 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.26□□□□□ -1.57
PRIM1P49642 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.26□□□□□ -1.57
PRIM1P49642 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.26□□□□□ -1.57
PRIM1P49642 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRIM1P49642 RNU6-1048P-201ENST00000364054 107 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 Y_RNA.251-201ENST00000364551 99 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 Y_RNA.310-201ENST00000365063 113 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 RNU6-597P-201ENST00000365620 102 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 AP002088.1-201ENST00000382740 395 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 SNORA22-201ENST00000383907 134 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 MIR93-201ENST00000385024 80 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 MIR34B-201ENST00000385076 84 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 MIR513A2-201ENST00000385249 127 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 CBX3P9-201ENST00000402326 552 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRIM1P49642 RPS29P2-201ENST00000479278 136 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 SNORA74D-201ENST00000516404 141 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 MTND5P34-201ENST00000568888 325 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.26□□□□□ -1.57
PRIM1P49642 MIR4679-1-201ENST00000637619 75 ntBASIC5.26□□□□□ -1.57
PRIM1P49642 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRIM1P49642 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRIM1P49642 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRIM1P49642 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRIM1P49642 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.25□□□□□ -1.57
PRIM1P49642 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRIM1P49642 U3.15-201ENST00000365398 212 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.25□□□□□ -1.57
PRIM1P49642 AC245047.4-201ENST00000433189 144 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 RNU7-141P-201ENST00000459304 62 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 ACA59.2-201ENST00000517061 156 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.25□□□□□ -1.57
PRIM1P49642 AC021739.1-201ENST00000559631 174 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 AC025281.1-201ENST00000567026 265 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 AC005562.2-201ENST00000618264 111 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.25□□□□□ -1.57
PRIM1P49642 AC068647.2-201ENST00000637380 353 ntBASIC5.25□□□□□ -1.57
PRIM1P49642 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.25□□□□□ -1.57
PRIM1P49642 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.25□□□□□ -1.57
PRIM1P49642 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRIM1P49642 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.25□□□□□ -1.57
PRIM1P49642 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRIM1P49642 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.24□□□□□ -1.57
PRIM1P49642 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRIM1P49642 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PRIM1P49642 SNORD114-7-201ENST00000362520 77 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 RNA5SP22-201ENST00000365393 109 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 Y_RNA.361-201ENST00000365515 120 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 Y_RNA.584-201ENST00000391090 114 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 SNORA11.2-201ENST00000408318 127 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 RNU6-588P-201ENST00000410281 105 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.24□□□□□ -1.57
PRIM1P49642 HMGN2P31-201ENST00000432430 273 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 HLA-N-201ENST00000437516 135 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 ABCF2P2-201ENST00000450549 296 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.24□□□□□ -1.57
PRIM1P49642 SRIP1-201ENST00000489235 288 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 RNA5SP154-201ENST00000516193 111 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 SNORA70.24-201ENST00000517233 118 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 RNA5SP179-201ENST00000517284 121 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 AC025627.2-201ENST00000576220 160 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 MIR3121-201ENST00000579680 77 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 AC091167.4-201ENST00000605079 184 ntBASIC5.24□□□□□ -1.57
PRIM1P49642 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PRIM1P49642 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PRIM1P49642 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRIM1P49642 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRIM1P49642 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRIM1P49642 MIR448-201ENST00000362131 111 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 SNORA25.7-201ENST00000364375 127 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 Y_RNA.572-201ENST00000384757 98 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 AL139281.1-201ENST00000422120 335 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.23□□□□□ -1.57
PRIM1P49642 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.23□□□□□ -1.57
PRIM1P49642 RNU6-581P-201ENST00000516214 105 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 AC087499.8-201ENST00000578406 226 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 AL034555.1-201ENST00000604816 211 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 RNU6-91P-201ENST00000607774 107 ntBASIC5.23□□□□□ -1.57
PRIM1P49642 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.23□□□□□ -1.57
PRIM1P49642 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PRIM1P49642 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.22□□□□□ -1.57
PRIM1P49642 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.22□□□□□ -1.57
PRIM1P49642 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 U3.8-201ENST00000363675 217 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 MIR183-201ENST00000384958 110 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms