Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CHRNA4P43681 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.05□□□□□ -1.76
CHRNA4P43681 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.05□□□□□ -1.76
CHRNA4P43681 SNORA60-201ENST00000362396 134 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 RNU1-62P-201ENST00000362599 164 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 RNU6-799P-201ENST00000363567 107 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 Y_RNA.163-201ENST00000363702 113 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 Y_RNA.310-201ENST00000365063 113 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 SNORA51.5-201ENST00000384126 131 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 SNORA51.10-201ENST00000384418 136 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 MIR29B2-201ENST00000385055 81 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 RNA5SP317-201ENST00000410176 116 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 RNU2-68P-201ENST00000410878 191 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 RNA5SP311-201ENST00000411290 116 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 AL356095.1-201ENST00000417217 199 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 AC007969.2-201ENST00000441891 191 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CHRNA4P43681 RNA5SP315-201ENST00000516340 116 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 RNA5SP312-201ENST00000517068 116 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 AC093331.1-201ENST00000521474 169 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 AL356575.1-201ENST00000603008 283 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.05□□□□□ -1.76
CHRNA4P43681 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.05□□□□□ -1.76
CHRNA4P43681 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CHRNA4P43681 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHRNA4P43681 MTND5P18-201ENST00000445624 1801 ntBASIC4.05□□□□□ -1.76
CHRNA4P43681 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CHRNA4P43681 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA4P43681 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.04□□□□□ -1.76
CHRNA4P43681 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.04□□□□□ -1.76
CHRNA4P43681 AL136964.1-201ENST00000622038 2990 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA4P43681 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CHRNA4P43681 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
CHRNA4P43681 AC092268.1-201ENST00000342691 405 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 Y_RNA.85-201ENST00000363014 111 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 Y_RNA.341-201ENST00000365341 102 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 RNU6-136P-201ENST00000384663 107 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 RNU6-813P-201ENST00000384691 107 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 SNORA79-201ENST00000408376 140 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 RNU6-855P-201ENST00000410395 104 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 RN7SKP177-201ENST00000410567 355 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA4P43681 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.04□□□□□ -1.76
CHRNA4P43681 AL590399.6-201ENST00000446396 307 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 AC010469.1-201ENST00000463864 576 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA4P43681 GNRHR2P1-201ENST00000555315 631 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 AL031274.2-201ENST00000599419 203 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 U73479.1-201ENST00000618062 168 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 AC009831.4-201ENST00000620744 325 ntBASIC4.04□□□□□ -1.76
CHRNA4P43681 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA4P43681 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA4P43681 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CHRNA4P43681 AC068254.2-201ENST00000623938 3577 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA4P43681 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA4P43681 RNU6-727P-201ENST00000363592 107 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RNA5SP399-201ENST00000364003 117 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RNU6-978P-201ENST00000364371 103 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RNU6-1074P-201ENST00000383995 104 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 SNORA70C-201ENST00000384538 135 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 MIR450A2-201ENST00000385022 100 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHRNA4P43681 SNORA26.3-201ENST00000391119 136 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RPL21P65-201ENST00000406094 466 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 AC078809.1-201ENST00000427601 140 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 AC009237.8-201ENST00000445492 379 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 SNRPGP7-201ENST00000469016 106 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 AC006445.2-201ENST00000510061 472 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RN7SKP43-201ENST00000516173 320 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RNU6-970P-201ENST00000516312 107 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 RNU6-1256P-201ENST00000516539 103 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 PRELID2P1-201ENST00000552837 301 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 CYCSP39-201ENST00000565821 309 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 AC131055.1-201ENST00000584626 316 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA4P43681 AC134878.1-201ENST00000619901 243 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 U6.99-201ENST00000637524 83 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 MIR492-201ENST00000638676 116 ntBASIC4.03□□□□□ -1.76
CHRNA4P43681 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA4P43681 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
CHRNA4P43681 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CHRNA4P43681 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
CHRNA4P43681 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.02□□□□□ -1.77
CHRNA4P43681 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CHRNA4P43681 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA4P43681 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA4P43681 DEFB108F-201ENST00000344638 222 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 U3.15-201ENST00000365398 212 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 RNU1-64P-201ENST00000365443 163 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 MIR518D-201ENST00000385014 87 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 MIR1302-5-201ENST00000408164 150 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 Y_RNA.622-201ENST00000411091 108 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 CYP4F29P-201ENST00000420685 446 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 AC012306.1-201ENST00000423267 114 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms