Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
SSR1P43307 AC040904.1-201ENST00000590850 223 ntBASIC1.54□□□□□ -2.16
SSR1P43307 VN1R80P-201ENST00000597126 338 ntBASIC1.54□□□□□ -2.16
SSR1P43307 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.54□□□□□ -2.16
SSR1P43307 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SSR1P43307 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SSR1P43307 RNU6-1097P-201ENST00000363586 107 ntBASIC1.53□□□□□ -2.16
SSR1P43307 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SSR1P43307 RNU6-26P-201ENST00000383985 107 ntBASIC1.53□□□□□ -2.16
SSR1P43307 Y_RNA.504-201ENST00000384481 104 ntBASIC1.53□□□□□ -2.16
SSR1P43307 SNORD73A-201ENST00000386062 65 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AL357139.1-201ENST00000407792 426 ntBASIC1.53□□□□□ -2.16
SSR1P43307 RNU4-46P-201ENST00000410818 138 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.53□□□□□ -2.16
SSR1P43307 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.53□□□□□ -2.16
SSR1P43307 SNAP23P1-201ENST00000433229 246 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.53□□□□□ -2.16
SSR1P43307 ZNF680P1-201ENST00000436625 1469 ntBASIC1.53□□□□□ -2.16
SSR1P43307 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
SSR1P43307 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SSR1P43307 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.53□□□□□ -2.16
SSR1P43307 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.53□□□□□ -2.16
SSR1P43307 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AP002963.1-201ENST00000530590 184 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.53□□□□□ -2.16
SSR1P43307 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.53□□□□□ -2.16
SSR1P43307 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
SSR1P43307 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SSR1P43307 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AC068205.3-201ENST00000636385 468 ntBASIC1.53□□□□□ -2.16
SSR1P43307 AL450472.1-202ENST00000637286 180 ntBASIC1.53□□□□□ -2.16
SSR1P43307 Y_RNA.332-201ENST00000365271 113 ntBASIC1.52□□□□□ -2.17
SSR1P43307 MTCO2P11-201ENST00000431069 680 ntBASIC1.52□□□□□ -2.17
SSR1P43307 MTND4P32-201ENST00000437189 1237 ntBASIC1.52□□□□□ -2.17
SSR1P43307 FTH1P25-201ENST00000447665 469 ntBASIC1.52□□□□□ -2.17
SSR1P43307 RPS27AP8-201ENST00000452665 445 ntBASIC1.52□□□□□ -2.17
SSR1P43307 AC097473.1-201ENST00000508142 408 ntBASIC1.52□□□□□ -2.17
SSR1P43307 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.52□□□□□ -2.17
SSR1P43307 MTND1P22-201ENST00000510572 951 ntBASIC1.52□□□□□ -2.17
SSR1P43307 Y_RNA.717-201ENST00000517106 92 ntBASIC1.52□□□□□ -2.17
SSR1P43307 AC115990.1-201ENST00000526957 301 ntBASIC1.52□□□□□ -2.17
SSR1P43307 AP003072.2-201ENST00000527756 676 ntBASIC1.52□□□□□ -2.17
SSR1P43307 AC091805.2-201ENST00000603848 235 ntBASIC1.52□□□□□ -2.17
SSR1P43307 AC008536.2-201ENST00000607284 349 ntBASIC1.52□□□□□ -2.17
SSR1P43307 AL603755.1-201ENST00000619504 163 ntBASIC1.52□□□□□ -2.17
SSR1P43307 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
SSR1P43307 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.51□□□□□ -2.17
SSR1P43307 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSR1P43307 RNU6-1141P-201ENST00000364520 107 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RNU6-434P-201ENST00000384376 107 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RN7SKP142-201ENST00000411236 328 ntBASIC1.51□□□□□ -2.17
SSR1P43307 MTCO3P41-201ENST00000414801 328 ntBASIC1.51□□□□□ -2.17
SSR1P43307 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.51□□□□□ -2.17
SSR1P43307 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.51□□□□□ -2.17
SSR1P43307 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.51□□□□□ -2.17
SSR1P43307 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.51□□□□□ -2.17
SSR1P43307 AC013470.1-201ENST00000453438 462 ntBASIC1.51□□□□□ -2.17
SSR1P43307 TOMM22P6-201ENST00000465035 409 ntBASIC1.51□□□□□ -2.17
SSR1P43307 AC079382.1-201ENST00000493346 557 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RNU6-1098P-201ENST00000516772 96 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RN7SKP219-201ENST00000516825 296 ntBASIC1.51□□□□□ -2.17
SSR1P43307 BNIP3P16-201ENST00000589779 534 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RSL24D1P11-201ENST00000591045 491 ntBASIC1.51□□□□□ -2.17
SSR1P43307 Z94722.1-201ENST00000604328 474 ntBASIC1.51□□□□□ -2.17
SSR1P43307 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
SSR1P43307 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
SSR1P43307 RNU6-85P-201ENST00000605989 107 ntBASIC1.51□□□□□ -2.17
SSR1P43307 AC009161.2-201ENST00000624626 138 ntBASIC1.51□□□□□ -2.17
SSR1P43307 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
SSR1P43307 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.51□□□□□ -2.17
SSR1P43307 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.5□□□□□ -2.17
SSR1P43307 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
SSR1P43307 Y_RNA.159-201ENST00000363674 87 ntBASIC1.5□□□□□ -2.17
SSR1P43307 RNU6-142P-201ENST00000384019 107 ntBASIC1.5□□□□□ -2.17
SSR1P43307 MIR549A-201ENST00000385268 96 ntBASIC1.5□□□□□ -2.17
SSR1P43307 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SSR1P43307 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
SSR1P43307 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.5□□□□□ -2.17
SSR1P43307 RPL21P111-201ENST00000418453 477 ntBASIC1.5□□□□□ -2.17
SSR1P43307 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.5□□□□□ -2.17
SSR1P43307 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.5□□□□□ -2.17
SSR1P43307 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.5□□□□□ -2.17
SSR1P43307 AL163973.1-201ENST00000484753 577 ntBASIC1.5□□□□□ -2.17
SSR1P43307 SUB1P4-201ENST00000566062 339 ntBASIC1.5□□□□□ -2.17
SSR1P43307 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.5□□□□□ -2.17
SSR1P43307 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SSR1P43307 AL390237.1-201ENST00000404226 1415 ntBASIC1.49□□□□□ -2.17
SSR1P43307 CBX3P1-201ENST00000325243 554 ntBASIC1.49□□□□□ -2.17
SSR1P43307 RNU6-552P-201ENST00000362869 119 ntBASIC1.49□□□□□ -2.17
SSR1P43307 RNU6-903P-201ENST00000391270 109 ntBASIC1.49□□□□□ -2.17
SSR1P43307 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.49□□□□□ -2.17
SSR1P43307 MTCYBP2-201ENST00000407745 171 ntBASIC1.49□□□□□ -2.17
SSR1P43307 RNA5SP201-201ENST00000410316 124 ntBASIC1.49□□□□□ -2.17
SSR1P43307 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
SSR1P43307 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.49□□□□□ -2.17
SSR1P43307 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.49□□□□□ -2.17
SSR1P43307 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
SSR1P43307 NCOR1P3-201ENST00000420479 303 ntBASIC1.49□□□□□ -2.17
SSR1P43307 AL121890.1-201ENST00000435457 205 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms