Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC004852.3-201ENST00000614131 326 ntBASIC3.2□□□□□ -1.9
CTGFP29279 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CTGFP29279 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTGFP29279 RPL9P7-201ENST00000330965 580 ntBASIC3.19□□□□□ -1.9
CTGFP29279 Y_RNA.16-201ENST00000362421 102 ntBASIC3.19□□□□□ -1.9
CTGFP29279 RNU6-1317P-201ENST00000364582 104 ntBASIC3.19□□□□□ -1.9
CTGFP29279 RNU4-42P-201ENST00000364738 142 ntBASIC3.19□□□□□ -1.9
CTGFP29279 SNORD50B-201ENST00000364995 70 ntBASIC3.19□□□□□ -1.9
CTGFP29279 RNU6-1035P-201ENST00000384477 107 ntBASIC3.19□□□□□ -1.9
CTGFP29279 RNU2-20P-201ENST00000410425 191 ntBASIC3.19□□□□□ -1.9
CTGFP29279 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
CTGFP29279 AL139156.1-201ENST00000412785 841 ntBASIC3.19□□□□□ -1.9
CTGFP29279 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.19□□□□□ -1.9
CTGFP29279 AL513043.1-201ENST00000439124 535 ntBASIC3.19□□□□□ -1.9
CTGFP29279 HMGB3P8-201ENST00000449709 577 ntBASIC3.19□□□□□ -1.9
CTGFP29279 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.19□□□□□ -1.9
CTGFP29279 RNA5SP310-201ENST00000459084 116 ntBASIC3.19□□□□□ -1.9
CTGFP29279 RPL9P9-202ENST00000466501 579 ntBASIC3.19□□□□□ -1.9
CTGFP29279 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.19□□□□□ -1.9
CTGFP29279 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.19□□□□□ -1.9
CTGFP29279 RNU5B-3P-201ENST00000516601 115 ntBASIC3.19□□□□□ -1.9
CTGFP29279 CBX3P8-201ENST00000532412 525 ntBASIC3.19□□□□□ -1.9
CTGFP29279 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.19□□□□□ -1.9
CTGFP29279 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.19□□□□□ -1.9
CTGFP29279 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
CTGFP29279 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.19□□□□□ -1.9
CTGFP29279 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTGFP29279 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTGFP29279 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTGFP29279 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTGFP29279 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CTGFP29279 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.18□□□□□ -1.9
CTGFP29279 ZNF658B-202ENST00000615961 3375 ntBASIC3.18□□□□□ -1.9
CTGFP29279 Z98749.2-208ENST00000381646 500 ntBASIC3.18□□□□□ -1.9
CTGFP29279 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTGFP29279 AL138878.1-201ENST00000405131 347 ntBASIC3.18□□□□□ -1.9
CTGFP29279 AL591034.1-201ENST00000407447 340 ntBASIC3.18□□□□□ -1.9
CTGFP29279 RNA5SP31-201ENST00000411144 127 ntBASIC3.18□□□□□ -1.9
CTGFP29279 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.18□□□□□ -1.9
CTGFP29279 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.18□□□□□ -1.9
CTGFP29279 COX6CP10-201ENST00000416832 224 ntBASIC3.18□□□□□ -1.9
CTGFP29279 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.18□□□□□ -1.9
CTGFP29279 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.18□□□□□ -1.9
CTGFP29279 BX276092.3-201ENST00000424182 230 ntBASIC3.18□□□□□ -1.9
CTGFP29279 MTCO3P29-201ENST00000432119 779 ntBASIC3.18□□□□□ -1.9
CTGFP29279 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.18□□□□□ -1.9
CTGFP29279 snoU109.2-201ENST00000459316 135 ntBASIC3.18□□□□□ -1.9
CTGFP29279 AK3P2-201ENST00000507976 429 ntBASIC3.18□□□□□ -1.9
CTGFP29279 RNU6-861P-201ENST00000516745 106 ntBASIC3.18□□□□□ -1.9
CTGFP29279 AC103996.1-201ENST00000555468 102 ntBASIC3.18□□□□□ -1.9
CTGFP29279 MIR3976-201ENST00000606807 139 ntBASIC3.18□□□□□ -1.9
CTGFP29279 U4.7-201ENST00000638126 106 ntBASIC3.18□□□□□ -1.9
CTGFP29279 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.18□□□□□ -1.9
CTGFP29279 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTGFP29279 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
CTGFP29279 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTGFP29279 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTGFP29279 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTGFP29279 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTGFP29279 AC002546.1-201ENST00000588041 2504 ntBASIC3.17□□□□□ -1.9
CTGFP29279 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTGFP29279 RNA5SP289-201ENST00000362332 137 ntBASIC3.17□□□□□ -1.9
CTGFP29279 RNU6-78P-201ENST00000362897 107 ntBASIC3.17□□□□□ -1.9
CTGFP29279 Y_RNA.84-201ENST00000363011 104 ntBASIC3.17□□□□□ -1.9
CTGFP29279 U8.2-201ENST00000363156 134 ntBASIC3.17□□□□□ -1.9
CTGFP29279 RNU6-884P-201ENST00000363889 107 ntBASIC3.17□□□□□ -1.9
CTGFP29279 U8.8-201ENST00000365399 135 ntBASIC3.17□□□□□ -1.9
CTGFP29279 RPS4XP3-201ENST00000398541 413 ntBASIC3.17□□□□□ -1.9
CTGFP29279 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
CTGFP29279 RNU2-25P-201ENST00000411041 191 ntBASIC3.17□□□□□ -1.9
CTGFP29279 NDUFS5P4-201ENST00000412983 318 ntBASIC3.17□□□□□ -1.9
CTGFP29279 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AC099799.1-201ENST00000439809 192 ntBASIC3.17□□□□□ -1.9
CTGFP29279 MTCO3P8-201ENST00000453691 755 ntBASIC3.17□□□□□ -1.9
CTGFP29279 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AC133134.1-201ENST00000466800 359 ntBASIC3.17□□□□□ -1.9
CTGFP29279 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.17□□□□□ -1.9
CTGFP29279 RNU6-377P-201ENST00000515965 102 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.17□□□□□ -1.9
CTGFP29279 AP004607.1-201ENST00000524456 203 ntBASIC3.17□□□□□ -1.9
CTGFP29279 DEFB108E-201ENST00000524692 240 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
CTGFP29279 SYF2P1-201ENST00000550658 413 ntBASIC3.17□□□□□ -1.9
CTGFP29279 LINC00933-203ENST00000559812 219 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.17□□□□□ -1.9
CTGFP29279 AC006600.1-201ENST00000572529 153 ntBASIC3.17□□□□□ -1.9
CTGFP29279 U2.14-201ENST00000615943 113 ntBASIC3.17□□□□□ -1.9
CTGFP29279 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.17□□□□□ -1.9
CTGFP29279 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTGFP29279 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTGFP29279 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTGFP29279 snoU2_19.2-201ENST00000363024 80 ntBASIC3.16□□□□□ -1.9
CTGFP29279 RNU6-704P-201ENST00000364162 103 ntBASIC3.16□□□□□ -1.9
CTGFP29279 RNU6-47P-201ENST00000383866 107 ntBASIC3.16□□□□□ -1.9
CTGFP29279 RNU6-804P-201ENST00000384286 107 ntBASIC3.16□□□□□ -1.9
CTGFP29279 SNORA51.11-201ENST00000384442 131 ntBASIC3.16□□□□□ -1.9
CTGFP29279 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
CTGFP29279 MIR518D-201ENST00000385014 87 ntBASIC3.16□□□□□ -1.9
CTGFP29279 AL591034.2-201ENST00000402839 359 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms